Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
2008-10-23
pubmed:abstractText
The Hnf1b transcription factor acts during formation of rhombomeres (r) 5 and 6 in the hindbrain. To determine if hnf1b is absolutely required in r5/r6, we examined the hnf1b(hi2169) and hnf1b(hi1843) retroviral insertion alleles. Hnf1b(hi2169) shows highly variable residual expression of several genes in r5/r6, but this is not due to full-length hnf1b transcripts persisting in hnf1b(hi2169) embryos, nor to hnf1bl, a novel hnf1 family member expressed in r5 that we identified. Instead, we find evidence for a virus-hnf1b fusion transcript in hnf1b(hi2169) embryos and demonstrate that morpholino-mediated knockdown of this transcript leads to near-undetectable r5 gene expression. The hnf1b(hi1843) allele has a more severe phenotype with near-undetectable expression of r5/r6 genes. We next examined if hoxb1b, which functions upstream of hnf1b in r5/r6 formation, can induce expression of r5/r6 genes in hnf1b mutants. We find that microinjected hoxb1b mRNA induces ectopic gene expression anterior to the hindbrain in hnf1b(hi2169) and hnf1b(hi1843) embryos, but cannot restore gene expression in r5/r6 of the mutants. We conclude that hnf1b(hi2169) is hypomorphic to hnf1b(hi1843) and that, while hnf1b is required for r5/r6 gene expression in the hindbrain, r5/r6 gene expression can be experimentally induced independently of hnf1b anterior to the hindbrain.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-10395784, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-10679934, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-10983974, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-11238377, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-11262231, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-11731484, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-11823429, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-11830560, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-11880356, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-11984869, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-12431378, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-12490204, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-12835397, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-15223339, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-15342476, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-15883028, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-16274963, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-16495311, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-16608922, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-17669392, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-7925021, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-8100767, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-9012518, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-9144291, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-9425135, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-9831563, http://linkedlifedata.com/resource/pubmed/commentcorrection/18945197-9895323
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
1557-8542
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
5
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
179-87
pubmed:dateRevised
2011-8-25
pubmed:meshHeading
pubmed:year
2008
pubmed:articleTitle
hnf1b genes in zebrafish hindbrain development.
pubmed:affiliation
Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, Massachusetts 01605-2324, USA.
pubmed:publicationType
Journal Article