Linked Life Data

18940857

Source:http://linkedlifedata.com/resource/pubmed/id/18940857

Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
Database issue
pubmed:dateCreated
2008-12-16
pubmed:abstractText
The Gene Expression Omnibus (GEO) at the National Center for Biotechnology Information (NCBI) is the largest public repository for high-throughput gene expression data. Additionally, GEO hosts other categories of high-throughput functional genomic data, including those that examine genome copy number variations, chromatin structure, methylation status and transcription factor binding. These data are generated by the research community using high-throughput technologies like microarrays and, more recently, next-generation sequencing. The database has a flexible infrastructure that can capture fully annotated raw and processed data, enabling compliance with major community-derived scientific reporting standards such as 'Minimum Information About a Microarray Experiment' (MIAME). In addition to serving as a centralized data storage hub, GEO offers many tools and features that allow users to effectively explore, analyze and download expression data from both gene-centric and experiment-centric perspectives. This article summarizes the GEO repository structure, content and operating procedures, as well as recently introduced data mining features. GEO is freely accessible at http://www.ncbi.nlm.nih.gov/geo/.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-11726920, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-11752295, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-15345376, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-17099226, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-17160034, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-17496320, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-18045790, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-18165803, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-18235428, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-18403677, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-18555785, http://linkedlifedata.com/resource/pubmed/commentcorrection/18940857-18600261
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:status
MEDLINE
pubmed:month
Jan
pubmed:issn
1362-4962
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
37
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
D885-90
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2009
pubmed:articleTitle
NCBI GEO: archive for high-throughput functional genomic data.
pubmed:affiliation
National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, Bethesda, MD 20892, USA. barrett@ncbi.nlm.nih.gov
pubmed:publicationType
Journal Article, Research Support, N.I.H., Intramural