Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
2009-5-8
pubmed:abstractText
Reflecting its high resolution and contrast capabilities, microcomputed tomography (microCT) can provide an in vivo assessment of adiposity with excellent spatial specificity in the mouse. Herein, an automated algorithm that separates the total abdominal adiposity into visceral and subcutaneous compartments is detailed. This algorithm relies on Canny edge detection and mathematical morphological operations to automate the manual contouring process that is otherwise required to spatially delineate the different adipose deposits. The algorithm was tested and verified with microCT scans from 74 C57BL/6J mice that had a broad range of body weights and adiposity. Despite the heterogeneity within this sample of mice, the algorithm demonstrated a high degree of stability and robustness that did not necessitate changing of any of the initially set input variables. Comparisons of data between the automated and manual methods were in complete agreement (R (2) = 0.99). Compared to manual contouring, the increase in precision and accuracy, while decreasing processing time by at least an order of magnitude, suggests that this algorithm can be used effectively to separately assess the development of total, visceral, and subcutaneous adiposity. As an application of this method, preliminary data from adult mice suggest that a relative increase in either subcutaneous, visceral, or total fat negatively influences skeletal quantity and that fat infiltration in the liver is greatly increased by a high-fat diet.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-11320099, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-11427222, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-12204842, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-12646443, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-14679176, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-16418756, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-16555257, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17282946, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17449775, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17488639, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17510504, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17576866, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17653280, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17720354, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17729369, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17828460, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17946011, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-17959771, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-2196040, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-2349931, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-7840063, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-7938225, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-8478169, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-8703575, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-8825235, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-9252082, http://linkedlifedata.com/resource/pubmed/commentcorrection/18769966-9426379
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:status
MEDLINE
pubmed:month
Jun
pubmed:issn
1618-727X
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
22
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
222-31
pubmed:dateRevised
2011-7-26
pubmed:meshHeading
pubmed:year
2009
pubmed:articleTitle
Automated separation of visceral and subcutaneous adiposity in in vivo microcomputed tomographies of mice.
pubmed:affiliation
Department of Biomedical Engineering, Stony Brook University, Stony Brook, NY 11794-2580, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S., Research Support, Non-U.S. Gov't, Research Support, N.I.H., Extramural