Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2008-9-5
pubmed:abstractText
TRIM5 alpha is a host protein that can bind to incoming retroviral capsid (CA) and inhibit retroviruses in a species-specific manner. The CA protein of HIV-1 also interacts with high affinity to the host protein cyclophilin A (CypA). This binding has been shown to positively affect some early stage of the viral life cycle in human cells. However, the CypA/CA interaction also renders HIV-1 more susceptible to rhesus TRIM5 alpha (rhTRIM5 alpha) restriction. We find that the ability of old world monkey TRIM5 alpha genes to restrict HIV-1 in a CypA-dependent manner is widespread. On the other hand, we find that simian immunodeficiency viruses from tantalus monkeys (SIVagmTAN), is unlike HIV-1 in that CypA does not enhance the rhTRIM5 alpha restriction against the virus even though the CA of this virus, like HIV-1, does bind CypA. Mapping of the determinants for this phenotype by swapping regions on CA between SIVagmTAN and HIV-1 showed that when SIVagmTAN contains loops between helices 4/5 (4-5 loop) and 6/7 (6-7 loop) from HIV-1 CA, it becomes susceptible to the CypA-enhanced rhTRIM5 alpha restriction. Surprisingly, when SIVagmTAN contains either loop from HIV-1 CA, it gains sensitivity to TRIM5 alpha from species which originally have no effect on the wild-type virus. Moreover, we find that CypA/CA interaction occurs early after viral entry but the CypA-enhanced restriction mostly acts on the stage after reverse transcription.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-11024136, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-11329067, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-12032547, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-12897779, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-14985764, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-15113921, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-15140964, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-15140998, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-15496950, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-15542632, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-15596813, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-15897199, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-15967037, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-15994791, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16051849, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16140735, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16203999, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16218773, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16306627, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16501094, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16540544, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16641261, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16643975, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16648264, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16650449, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16828831, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-16973579, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-17038183, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-17522232, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-17588933, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-17694678, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-7491763, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-7969494, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-7969495, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-8513493, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-8648689, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-8662505, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-8676442, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-8806510, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-8980234, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-9123848, http://linkedlifedata.com/resource/pubmed/commentcorrection/18678385-9380739
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
1096-0341
pubmed:author
pubmed:issnType
Electronic
pubmed:day
30
pubmed:volume
379
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
335-41
pubmed:dateRevised
2010-12-3
pubmed:meshHeading
pubmed-meshheading:18678385-Animals, pubmed-meshheading:18678385-Base Sequence, pubmed-meshheading:18678385-Binding Sites, pubmed-meshheading:18678385-Capsid Proteins, pubmed-meshheading:18678385-Cell Line, pubmed-meshheading:18678385-Cercopithecus aethiops, pubmed-meshheading:18678385-Cyclophilin A, pubmed-meshheading:18678385-DNA, Viral, pubmed-meshheading:18678385-DNA Primers, pubmed-meshheading:18678385-HIV-1, pubmed-meshheading:18678385-Host-Pathogen Interactions, pubmed-meshheading:18678385-Humans, pubmed-meshheading:18678385-Macaca mulatta, pubmed-meshheading:18678385-Protein Binding, pubmed-meshheading:18678385-Protein Structure, Secondary, pubmed-meshheading:18678385-Proteins, pubmed-meshheading:18678385-Simian immunodeficiency virus, pubmed-meshheading:18678385-Species Specificity, pubmed-meshheading:18678385-Virus Internalization
pubmed:year
2008
pubmed:articleTitle
Determinants of cyclophilin A-dependent TRIM5 alpha restriction against HIV-1.
pubmed:affiliation
Pathobiology Graduate Program, Department of Global Health, University of Washington, Seattle, WA 98195, USA.
pubmed:publicationType
Journal Article