Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
17
pubmed:dateCreated
2008-8-15
pubmed:abstractText
The heterogeneous nuclear ribonucleoprotein H (hnRNP) family of proteins has been shown to activate exon inclusion by binding intronic G triplets. Much less is known, however, about how hnRNP H and hnRNP F silence exons. In this study, we identify hnRNP H and hnRNP F proteins as being novel silencers of fibroblast growth factor receptor 2 exon IIIc. In cells that normally include this exon, we show that the overexpression of either hnRNP H1 or hnRNP F resulted in the dramatic silencing of exon IIIc. In cells that normally skip exon IIIc, skipping was disrupted when RNA interference was used to knock down both hnRNP H and hnRNP F. We show that an exonic GGG motif overlapped a critical exonic splicing enhancer, which was predicted to bind the SR protein ASF/SF2. Furthermore, the expression of ASF/SF2 reversed the silencing of exon IIIc caused by the expression of hnRNP H1. We show that hnRNP H and hnRNP F proteins are present in a complex with Fox2 and that the presence of Fox allows hnRNP H1 to better compete with ASF/SF2 for binding to exon IIIc. These results establish hnRNP H and hnRNP F as being repressors of exon inclusion and suggest that Fox proteins enhance their ability to antagonize ASF/SF2.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-10072387, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-10982855, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-11137998, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-11313454, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-11526107, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-11571276, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-11751603, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-11779509, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-11847131, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-11925564, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-12612063, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-12626338, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-12824367, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-14612416, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-14703516, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-15208309, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-15607979, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-15828859, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-15837790, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-16147989, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-16362037, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-16396608, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-16449636, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-1648704, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-16825284, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-16885237, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-17000773, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-17298175, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-17567613, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-6828386, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-7590243, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-7957114, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-8332490, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-8639505, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-9030686, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-9444954, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-9528792, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-9740129, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-9858532, http://linkedlifedata.com/resource/pubmed/commentcorrection/18573884-9858549
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
1098-5549
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
28
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
5403-19
pubmed:dateRevised
2011-10-10
pubmed:meshHeading
pubmed-meshheading:18573884-Amino Acid Sequence, pubmed-meshheading:18573884-Animals, pubmed-meshheading:18573884-Base Sequence, pubmed-meshheading:18573884-Binding, Competitive, pubmed-meshheading:18573884-Cell Line, pubmed-meshheading:18573884-Conserved Sequence, pubmed-meshheading:18573884-DNA Mutational Analysis, pubmed-meshheading:18573884-Exons, pubmed-meshheading:18573884-Gene Silencing, pubmed-meshheading:18573884-Heterogeneous-Nuclear Ribonucleoprotein Group F-H, pubmed-meshheading:18573884-Humans, pubmed-meshheading:18573884-Immunoprecipitation, pubmed-meshheading:18573884-Molecular Sequence Data, pubmed-meshheading:18573884-Nuclear Proteins, pubmed-meshheading:18573884-Protein Binding, pubmed-meshheading:18573884-RNA-Binding Proteins, pubmed-meshheading:18573884-Rats, pubmed-meshheading:18573884-Receptor, Fibroblast Growth Factor, Type 2, pubmed-meshheading:18573884-Regulatory Sequences, Nucleic Acid, pubmed-meshheading:18573884-Repressor Proteins, pubmed-meshheading:18573884-Sequence Alignment, pubmed-meshheading:18573884-Structure-Activity Relationship
pubmed:year
2008
pubmed:articleTitle
hnRNP H and hnRNP F complex with Fox2 to silence fibroblast growth factor receptor 2 exon IIIc.
pubmed:affiliation
Box 3053 (424 CARL), Duke University Medical Center, Research Drive, Durham, NC 27710, USA.
pubmed:publicationType
Journal Article, Research Support, N.I.H., Extramural