Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
7
pubmed:dateCreated
2008-7-1
pubmed:abstractText
The zebrafish u-boot (ubo) gene encodes the transcription factor Prdm1, which is essential for the specification of the primary slow-twitch muscle fibres that derive from adaxial cells. Here, we show that Prdm1 functions by acting as a transcriptional repressor and that slow-twitch-specific muscle gene expression is activated by Prdm1-mediated repression of the transcriptional repressor Sox6. Genes encoding fast-specific isoforms of sarcomeric proteins are ectopically expressed in the adaxial cells of ubo(tp39) mutant embryos. By using chromatin immunoprecipitation, we show that these are direct targets of Prdm1. Thus, Prdm1 promotes slow-twitch fibre differentiation by acting as a global repressor of fast-fibre-specific genes, as well as by abrogating the repression of slow-fibre-specific genes.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-10642786, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-10713181, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-10769242, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-11002340, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-11410536, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-11493557, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-12052884, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-12204275, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-12701095, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-12761854, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-12867027, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-14702044, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-14985713, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-15223344, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-15494505, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-15750184, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-15937476, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-16124007, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-16412219, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-16888327, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-16889661, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-17291741, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-17529975, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-17584907, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-17670792, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-18480160, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-1851123, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-8168136, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-8589427, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-8684485, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-8951054, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-9007237, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-9303533, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-9314535, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-9371792, http://linkedlifedata.com/resource/pubmed/commentcorrection/18535625-9441668
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jul
pubmed:issn
1469-3178
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
9
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
683-9
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:18535625-Animals, pubmed-meshheading:18535625-Binding Sites, pubmed-meshheading:18535625-Cardiac Myosins, pubmed-meshheading:18535625-Cell Differentiation, pubmed-meshheading:18535625-Chromatin Immunoprecipitation, pubmed-meshheading:18535625-DNA-Binding Proteins, pubmed-meshheading:18535625-Embryo, Nonmammalian, pubmed-meshheading:18535625-Gene Expression Regulation, Developmental, pubmed-meshheading:18535625-Muscle Fibers, Fast-Twitch, pubmed-meshheading:18535625-Muscle Fibers, Skeletal, pubmed-meshheading:18535625-Muscle Fibers, Slow-Twitch, pubmed-meshheading:18535625-Mutation, pubmed-meshheading:18535625-Myosin Light Chains, pubmed-meshheading:18535625-Nuclear Proteins, pubmed-meshheading:18535625-Organ Specificity, pubmed-meshheading:18535625-Promoter Regions, Genetic, pubmed-meshheading:18535625-Repressor Proteins, pubmed-meshheading:18535625-Transcription, Genetic, pubmed-meshheading:18535625-Up-Regulation, pubmed-meshheading:18535625-Zebrafish, pubmed-meshheading:18535625-Zebrafish Proteins
pubmed:year
2008
pubmed:articleTitle
Prdm1- and Sox6-mediated transcriptional repression specifies muscle fibre type in the zebrafish embryo.
pubmed:affiliation
MRC Centre for Developmental and Biomedical Genetics, University of Sheffield, Firth Court, Western Bank, Sheffield S10 2TN, UK.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't