Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
18
pubmed:dateCreated
2008-5-7
pubmed:databankReference
pubmed:abstractText
ATP-dependent chromatin remodeling complexes are a notable group of epigenetic modifiers that use the energy of ATP hydrolysis to change the structure of chromatin, thereby altering its accessibility to nuclear factors. BAF250a (ARID1a) is a unique and defining subunit of the BAF chromatin remodeling complex with the potential to facilitate chromosome alterations critical during development. Our studies show that ablation of BAF250a in early mouse embryos results in developmental arrest (about embryonic day 6.5) and absence of the mesodermal layer, indicating its critical role in early germ-layer formation. Moreover, BAF250a deficiency compromises ES cell pluripotency, severely inhibits self-renewal, and promotes differentiation into primitive endoderm-like cells under normal feeder-free culture conditions. Interestingly, this phenotype can be partially rescued by the presence of embryonic fibroblast cells. DNA microarray, immunostaining, and RNA analyses revealed that BAF250a-mediated chromatin remodeling contributes to the proper expression of numerous genes involved in ES cell self-renewal, including Sox2, Utf1, and Oct4. Furthermore, the pluripotency defects in BAF250a mutant ES cells appear to be cell lineage-specific. For example, embryoid body-based analyses demonstrated that BAF250a-ablated stem cells are defective in differentiating into fully functional mesoderm-derived cardiomyocytes and adipocytes but are capable of differentiating into ectoderm-derived neurons. Our results suggest that BAF250a is a key component of the gene regulatory machinery in ES cells controlling self-renewal, differentiation, and cell lineage decisions.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-10757798, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-11073988, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-11075368, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-11095756, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-11163203, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-11263494, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-11306549, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-11313485, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-11604513, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-12596907, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-14964309, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-15601824, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-15753215, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-16007198, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-16625203, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-16708073, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-16818606, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-16821133, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-16920351, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-17320505, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-17320511, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-17920018, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-7720590, http://linkedlifedata.com/resource/pubmed/commentcorrection/18448678-9895321
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
1091-6490
pubmed:author
pubmed:issnType
Electronic
pubmed:day
6
pubmed:volume
105
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
6656-61
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:18448678-Adipocytes, pubmed-meshheading:18448678-Animals, pubmed-meshheading:18448678-Cell Differentiation, pubmed-meshheading:18448678-Cell Line, pubmed-meshheading:18448678-Cell Lineage, pubmed-meshheading:18448678-Cell Proliferation, pubmed-meshheading:18448678-Chromatin Assembly and Disassembly, pubmed-meshheading:18448678-Chromosomal Proteins, Non-Histone, pubmed-meshheading:18448678-DNA-Binding Proteins, pubmed-meshheading:18448678-Embryo, Mammalian, pubmed-meshheading:18448678-Embryonic Development, pubmed-meshheading:18448678-Embryonic Stem Cells, pubmed-meshheading:18448678-Female, pubmed-meshheading:18448678-Genes, Developmental, pubmed-meshheading:18448678-Germ Layers, pubmed-meshheading:18448678-Male, pubmed-meshheading:18448678-Mice, pubmed-meshheading:18448678-Mice, Knockout, pubmed-meshheading:18448678-Muscle, Skeletal, pubmed-meshheading:18448678-Myocytes, Cardiac, pubmed-meshheading:18448678-Nuclear Proteins, pubmed-meshheading:18448678-Pluripotent Stem Cells, pubmed-meshheading:18448678-Transcription Factors
pubmed:year
2008
pubmed:articleTitle
ES cell pluripotency and germ-layer formation require the SWI/SNF chromatin remodeling component BAF250a.
pubmed:affiliation
Cardiovascular Research Center, Massachusetts General Hospital, Harvard Medical School, Richard Simches Research Center, 185 Cambridge Street, Boston, MA 02114, USA.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't