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pubmed-article:18428918pubmed:abstractTextPyrene is a useful chromophore for monitoring the tertiary structure and folding of large RNAs. This unit describes the general preparation of a large RNA (>80 nucleotides in length) that has been site-specifically modified with pyrene at the 2'-position of an individual internal nucleotide. A protocol is provided for derivatizing a 2'-amino-RNA oligonucleotide with a suitably activated pyrene reagent. This pyrene-labeled oligonucleotide is then assembled with other RNA(s) either by covalent ligation or by noncovalent hybridization to form a full-length structured RNA, which may then be studied by equilibrium and stopped-flow fluorescence spectroscopy.lld:pubmed
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pubmed-article:18428918pubmed:authorpubmed-author:SmalleyMary...lld:pubmed
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pubmed-article:18428918pubmed:volumeChapter 11lld:pubmed
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pubmed-article:18428918pubmed:paginationUnit 11.11lld:pubmed
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pubmed-article:18428918pubmed:year2004lld:pubmed
pubmed-article:18428918pubmed:articleTitleSite-specific fluorescent labeling of large RNAs with pyrene.lld:pubmed
pubmed-article:18428918pubmed:affiliationUniversity of Illinois at Urbana-Champaign, Urbana, Illinois, USA.lld:pubmed
pubmed-article:18428918pubmed:publicationTypeJournal Articlelld:pubmed