Linked Life Data

18319462

Source:http://linkedlifedata.com/resource/pubmed/id/18319462

Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
Pt 3
pubmed:dateCreated
2008-3-5
pubmed:databankReference
pubmed:abstractText
A Gram-positive, non-motile, coccoid-shaped bacterium, designated strain DS-8(T), was isolated from soil from Dokdo, Korea, and its taxonomic position was investigated by using a polyphasic study. Strain DS-8(T) grew optimally at 30 degrees C and pH 6.5-7.5 in the presence of 0.5-1.0 % (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain DS-8(T) joined the type strain of Phycicoccus jejuensis, with a bootstrap resampling value of 92.5 %, and shared 96.5 % 16S rRNA gene sequence similarity with P. jejuensis. The cell-wall peptidoglycan type was based on meso-diaminopimelic acid and the acyl type of the muramic acid was acetyl. The predominant menaquinone was MK-8(H(4)). The major fatty acids were iso-C(15 : 0) and iso-C(16 : 0). Major polar lipids detected in strain DS-8(T) were phosphatidylinositol, phosphatidylglycerol, diphosphatidylglycerol and two unidentified phospholipids. The DNA G+C content was 70.7 mol%. DNA-DNA relatedness data and differential phenotypic properties, together with the phylogenetic distinctiveness, revealed that strain DS-8(T) differs from P. jejuensis. On the basis of the data obtained, strain DS-8(T) is considered to represent a novel species of the genus Phycicoccus, for which the name Phycicoccus dokdonensis sp. nov. is proposed. The type strain is DS-8(T) (=KCTC 19248(T)=CCUG 54521(T)).
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
1466-5026
pubmed:author
pubmed:issnType
Print
pubmed:volume
58
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
597-600
pubmed:meshHeading
pubmed:year
2008
pubmed:articleTitle
Phycicoccus dokdonensis sp. nov., isolated from soil.
pubmed:affiliation
Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Republic of Korea. jhyoon@kribb.re.kr
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't