Source:http://linkedlifedata.com/resource/pubmed/id/18310485
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
6
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pubmed:dateCreated |
2008-5-21
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pubmed:abstractText |
The aim of this note is to describe a reliable, fast, and cost-effective real-time PCR method for routine genotyping of mutations responsible for most coat color variation in horses. The melanocortin-1 receptor, Agouti-signaling peptide, and membrane-associated transporter protein alleles were simultaneously determined using 2 PCR protocols. The assay described here is an alternative method for routine genotyping of a defined number of polymorphisms. Allelic variants are detected in real time and no post-PCR manipulations are required, therefore limiting costs and possible carryover contamination. Data can be copied to a Microsoft Excel spreadsheet for semiautomatic determination of the genotype using a macro freely available at http://www.igijon.com/personales/fgoyache/software_i.htm (last accessed February 26, 2007). The performance of the method is demonstrated on 156 Spanish Purebred horses.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Agouti Signaling Protein,
http://linkedlifedata.com/resource/pubmed/chemical/DNA Primers,
http://linkedlifedata.com/resource/pubmed/chemical/DNA Probes,
http://linkedlifedata.com/resource/pubmed/chemical/Membrane Transport Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/Receptor, Melanocortin, Type 1
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pubmed:status |
MEDLINE
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pubmed:month |
Jun
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pubmed:issn |
1525-3163
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:volume |
86
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
1291-5
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pubmed:meshHeading |
pubmed-meshheading:18310485-Agouti Signaling Protein,
pubmed-meshheading:18310485-Alleles,
pubmed-meshheading:18310485-Animals,
pubmed-meshheading:18310485-DNA Primers,
pubmed-meshheading:18310485-DNA Probes,
pubmed-meshheading:18310485-Female,
pubmed-meshheading:18310485-Genotype,
pubmed-meshheading:18310485-Hair Color,
pubmed-meshheading:18310485-Horses,
pubmed-meshheading:18310485-Male,
pubmed-meshheading:18310485-Membrane Transport Proteins,
pubmed-meshheading:18310485-Mutation,
pubmed-meshheading:18310485-Polymerase Chain Reaction,
pubmed-meshheading:18310485-Receptor, Melanocortin, Type 1,
pubmed-meshheading:18310485-Sensitivity and Specificity
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pubmed:year |
2008
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pubmed:articleTitle |
Technical note: a novel method for routine genotyping of horse coat color gene polymorphisms.
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pubmed:affiliation |
Servicio Regional de Investigación y Desarrollo Agroalimentario del Principado de Asturias-Somió, C/Camino de los Claveles 604, E-33203 Gijón (Asturias), Spain.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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