Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2008-2-21
pubmed:abstractText
Patients and vertebrate mutants with oculocutaneous albinism type 4 (OCA4) have mutations in the solute carrier family 45 member 2 (slc45a2) gene. However, there is no empirical evidence for this gene-phenotype relationship. There is a unique OCA4 mutant in medaka (b) that exhibits albinism only in the skin, but the mechanism underlying this phenotype is also unknown. In this study, we rescued medaka OCA4 phenotypes, in both the eyes and the skin, by micro-injection of an slc45a2-containing genomic fragment or slc45a2 cDNA driven by its own 0.9-kb promoter. We also identified a spontaneous nucleotide change of 339 bp in the promoter as the b mutation. There are multiple transcription start sites in medaka slc45a2, as in its human ortholog, and only the shortest and eye-specific mRNA is transcribed with the b mutation. Interestingly, we further revealed a conserved pyrimidine (Py)-rich sequence of approximately 10 bp in the promoter by medaka-pufferfish comparative genomics and verified that it plays an indispensable role for expression of slc45a2 in the skin. Further studies of the 0.9-kb promoter identified in this study should provide insights into the cis/trans-regulatory mechanisms underlying the ocular and cutaneous expression of slc45a2.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-10862741, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-11159318, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-11479596, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-11526229, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-11574907, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-11700328, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-11916009, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-12128226, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-12130818, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-12354656, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-12605854, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-12829739, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-14660543, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-15016305, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-15118236, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-15131651, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-15153998, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-15249680, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-15579703, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-16162863, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-16845369, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-17044855, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-17151254, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-17245975, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-17358008, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-17554307, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-17703194, http://linkedlifedata.com/resource/pubmed/commentcorrection/18245373-8502625
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Feb
pubmed:issn
0016-6731
pubmed:author
pubmed:issnType
Print
pubmed:volume
178
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
761-9
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2008
pubmed:articleTitle
Rescue from oculocutaneous albinism type 4 using medaka slc45a2 cDNA driven by its own promoter.
pubmed:affiliation
Department of Integrated Biosciences, University of Tokyo, Chiba, Japan. shoji.fukamachi@uni-konstanz.de
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't