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rdf:type |
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lifeskim:mentions |
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pubmed:issue |
2
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pubmed:dateCreated |
2008-1-25
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pubmed:abstractText |
Raman spectroscopy is a molecular vibrational spectroscopic technique that is capable of optically probing the biomolecular changes associated with diseased transformation. The purpose of this study was to explore near-infrared (NIR) Raman spectroscopy for identifying dysplasia from normal gastric mucosa tissue. A rapid-acquisition dispersive-type NIR Raman system was utilised for tissue Raman spectroscopic measurements at 785 nm laser excitation. A total of 76 gastric tissue samples obtained from 44 patients who underwent endoscopy investigation or gastrectomy operation were used in this study. The histopathological examinations showed that 55 tissue specimens were normal and 21 were dysplasia. Both the empirical approach and multivariate statistical techniques, including principal components analysis (PCA), and linear discriminant analysis (LDA), together with the leave-one-sample-out cross-validation method, were employed to develop effective diagnostic algorithms for classification of Raman spectra between normal and dysplastic gastric tissues. High-quality Raman spectra in the range of 800-1800 cm(-1) can be acquired from gastric tissue within 5 s. There are specific spectral differences in Raman spectra between normal and dysplasia tissue, particularly in the spectral ranges of 1200-1500 cm(-1) and 1600-1800 cm(-1), which contained signals related to amide III and amide I of proteins, CH(3)CH(2) twisting of proteins/nucleic acids, and the C=C stretching mode of phospholipids, respectively. The empirical diagnostic algorithm based on the ratio of the Raman peak intensity at 875 cm(-1) to the peak intensity at 1450 cm(-1) gave the diagnostic sensitivity of 85.7% and specificity of 80.0%, whereas the diagnostic algorithms based on PCA-LDA yielded the diagnostic sensitivity of 95.2% and specificity 90.9% for separating dysplasia from normal gastric tissue. Receiver operating characteristic (ROC) curves further confirmed that the most effective diagnostic algorithm can be derived from the PCA-LDA technique. Therefore, NIR Raman spectroscopy in conjunction with multivariate statistical technique has potential for rapid diagnosis of dysplasia in the stomach based on the optical evaluation of spectral features of biomolecules.
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pubmed:commentsCorrections |
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-10517922,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-10911740,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-11037840,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-11140770,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-11531873,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-11830520,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-12209741,
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http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-12612529,
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http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-14992404,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-14992412,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-15568940,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-15869327,
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http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-16229631,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-16622450,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-16997154,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-17000267,
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-17650367,
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http://linkedlifedata.com/resource/pubmed/commentcorrection/18195711-9747597
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:status |
MEDLINE
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pubmed:month |
Jan
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pubmed:issn |
0007-0920
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pubmed:author |
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pubmed:issnType |
Print
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pubmed:day |
29
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pubmed:volume |
98
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
457-65
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pubmed:dateRevised |
2009-11-18
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pubmed:meshHeading |
pubmed-meshheading:18195711-Algorithms,
pubmed-meshheading:18195711-Diagnosis, Differential,
pubmed-meshheading:18195711-Feasibility Studies,
pubmed-meshheading:18195711-Female,
pubmed-meshheading:18195711-Humans,
pubmed-meshheading:18195711-Linear Models,
pubmed-meshheading:18195711-Male,
pubmed-meshheading:18195711-Middle Aged,
pubmed-meshheading:18195711-Precancerous Conditions,
pubmed-meshheading:18195711-Principal Component Analysis,
pubmed-meshheading:18195711-Sensitivity and Specificity,
pubmed-meshheading:18195711-Spectroscopy, Near-Infrared,
pubmed-meshheading:18195711-Spectrum Analysis, Raman,
pubmed-meshheading:18195711-Stomach Diseases
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pubmed:year |
2008
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pubmed:articleTitle |
Diagnostic potential of near-infrared Raman spectroscopy in the stomach: differentiating dysplasia from normal tissue.
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pubmed:affiliation |
Bioimaging Laboratory, Division of Bioengineering, Faculty of Engineering, National University of Singapore, Singapore 117576, Singapore.
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pubmed:publicationType |
Journal Article,
Comparative Study,
Research Support, Non-U.S. Gov't,
Evaluation Studies
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