Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6
pubmed:dateCreated
2008-2-29
pubmed:abstractText
We have used the chicken mim-1 gene as a model to study the mechanisms by which transcription factors gain initial access to their target sites in compacted chromatin. The expression of mim-1 is restricted to the myelomonocytic lineage of the hematopoietic system where it is regulated synergistically by the Myb and CCAAT/enhancer binding protein (C/EBP) factors. Myb and C/EBPbeta cooperate at two distinct cis elements of mim-1, the promoter and a cell-type-specific enhancer, both of which are associated with DNase I hypersensitive sites in myelomonocytic cells but not in mim-1-nonexpressing cells. Previous work has shown that ectopic expression of Myb and C/EBPbeta activates the endogenous mim-1 gene in a nonhematopoietic cell type (fibroblasts), where the gene is normally completely silent. Here, we investigated the molecular details of this finding and show that the activation of mim-1 occurs by two independent mechanisms. In the absence of Myb, C/EBPbeta triggers the initial steps of chromatin opening at the mim-1 enhancer without inducing transcription of the gene. mim-1 transcription occurs only in the presence of Myb and is associated with chromatin opening at the promoter. Our work identifies a novel function for C/EBPbeta in the initial steps of a localized chromatin opening at a specific, physiologically relevant target region.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-10603305, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-10619021, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-10635321, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-10921904, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-10921906, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-10950873, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-11106736, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-11864602, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-12045097, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-12559577, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-12574124, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-12588998, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-12820972, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-1322247, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-15143161, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-15601869, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-1576954, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-16199876, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-16882978, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-16959612, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-17030999, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-1718743, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-17320507, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-17320508, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-17658261, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-1934061, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-2688896, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-2996773, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-7684005, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-7862134, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8132673, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8179929, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8491193, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8557032, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8628296, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8654374, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8657104, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8682297, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8813130, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8902808, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-8939065, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-9135152, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-9343424, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-9379950, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-9721238, http://linkedlifedata.com/resource/pubmed/commentcorrection/18195047-9759497
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
1098-5549
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
28
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2102-12
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:18195047-Animals, pubmed-meshheading:18195047-Fibroblasts, pubmed-meshheading:18195047-Base Sequence, pubmed-meshheading:18195047-Chickens, pubmed-meshheading:18195047-Chromatin, pubmed-meshheading:18195047-Binding Sites, pubmed-meshheading:18195047-Cell Line, pubmed-meshheading:18195047-Molecular Sequence Data, pubmed-meshheading:18195047-Protein Structure, Tertiary, pubmed-meshheading:18195047-Multipotent Stem Cells, pubmed-meshheading:18195047-Myeloid Cells, pubmed-meshheading:18195047-Acetyltransferases, pubmed-meshheading:18195047-Sequence Deletion, pubmed-meshheading:18195047-Transcriptional Activation, pubmed-meshheading:18195047-Recombinant Fusion Proteins, pubmed-meshheading:18195047-Enhancer Elements, Genetic, pubmed-meshheading:18195047-Oncogene Proteins v-myb, pubmed-meshheading:18195047-Proto-Oncogene Proteins c-myb, pubmed-meshheading:18195047-CCAAT-Enhancer-Binding Protein-beta, pubmed-meshheading:18195047-Myelopoiesis
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