Source:http://linkedlifedata.com/resource/pubmed/id/18071891
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1
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pubmed:dateCreated |
2008-2-4
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pubmed:abstractText |
Sequencing analysis of the isolates of a recently identified pathogen associated with respiratory infections, human bocavirus (HBoV), allowed for identification of two virus genotypes of the virus. In the current article a new method for a simple and fast differentiation of HBoV genotypes in clinical materials is described. The test includes an amplification of a 309 bp fragment of VP1/VP2 gene of HBoV from nasopharyngeal aspirates with a subsequent incubation of a PCR mix with the BstAPI endonuclease. Upon such a digestion, the DNA fragment derived from the genotype I HBoV isolates forms two fragments of 150 and 159 bp, while that obtained from genotype 2 isolates remains unrestricted. The developed technique may be used in epidemiological studies of HBoV infection and analysis of the potential differences in biological characteristics of HboV genotypes.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Feb
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pubmed:issn |
0920-8569
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
36
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
67-9
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pubmed:meshHeading |
pubmed-meshheading:18071891-Base Sequence,
pubmed-meshheading:18071891-Bocavirus,
pubmed-meshheading:18071891-DNA, Viral,
pubmed-meshheading:18071891-Genotype,
pubmed-meshheading:18071891-Humans,
pubmed-meshheading:18071891-Molecular Sequence Data,
pubmed-meshheading:18071891-Polymerase Chain Reaction,
pubmed-meshheading:18071891-Polymorphism, Restriction Fragment Length,
pubmed-meshheading:18071891-Sequence Alignment
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pubmed:year |
2008
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pubmed:articleTitle |
Genotyping of human bocavirus using a restriction length polymorphism.
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pubmed:affiliation |
Institute for Virology, University of Bonn, Sigmund-Freud-Strasse 25, 53105 Bonn, Germany.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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