Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
1
pubmed:dateCreated
2008-1-3
pubmed:abstractText
Chlamydia trachomatis is the most common cause of sexually transmitted infections in the UK, a statistic that is also reflected globally. There are three biovariants of C. trachomatis: trachoma (serotypes A-C) and two sexually transmitted pathovars; serotypes D-K and lymphogranuloma venereum (LGV). Trachoma isolates and the sexually transmitted serotypes D-K are noninvasive, whereas the LGV strains are invasive, causing a disseminating infection of the local draining lymph nodes. Genome sequences are available for single isolates from the trachoma (serotype A) and sexually transmitted (serotype D) biotypes. We sequenced two isolates from the remaining biotype, LGV, a long-term laboratory passaged strain and the recent "epidemic" LGV isolate-causing proctitis. Although the genome of the LGV strain shows no additional genes that could account for the differences in disease outcome, we found evidence of functional gene loss and identified regions of heightened sequence variation that have previously been shown to be important sites for interstrain recombination. We have used new sequencing technologies to show that the recent clinical LGV isolate causing proctitis is unlikely to be a newly emerged strain but is most probably an old strain with relatively new clinical manifestations.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-10325427, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-10479178, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-10539858, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-10572314, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-10587946, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-10684935, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-10688204, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-10827456, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-11207561, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-11707582, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-11840563, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-11909744, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-11980912, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-12011099, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-12081191, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-12682364, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-12782678, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-12834606, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-12846394, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-12958277, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-14663119, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-15052340, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-15557630, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-1569006, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-15837807, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-15838905, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-15912077, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-15976072, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-16022786, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-16056220, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-16177312, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-16239014, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-16309458, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-16368959, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-16766509, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-16855258, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-17028176, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-17090662, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-2845228, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-3005475, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-3444411, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-6296045, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-7739379, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-8606080, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-8838178, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-8969247, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-9367129, http://linkedlifedata.com/resource/pubmed/commentcorrection/18032721-9784136
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:status
MEDLINE
pubmed:month
Jan
pubmed:issn
1088-9051
pubmed:author
pubmed:issnType
Print
pubmed:volume
18
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
161-71
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2008
pubmed:articleTitle
Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates.
pubmed:affiliation
The Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK. nrt@sanger.ac.uk
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't