rdf:type |
|
lifeskim:mentions |
umls-concept:C0020792,
umls-concept:C0037813,
umls-concept:C0086418,
umls-concept:C0205145,
umls-concept:C0314672,
umls-concept:C0443131,
umls-concept:C0679199,
umls-concept:C1514623,
umls-concept:C1515655,
umls-concept:C1516451,
umls-concept:C1533691
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pubmed:issue |
1
|
pubmed:dateCreated |
2008-1-7
|
pubmed:abstractText |
The length and precise linkage of polyubiquitin chains is important for their biological activity. Although other ubiquitin-like proteins have the potential to form polymeric chains their identification in vivo is challenging and their functional role is unclear. Vertebrates express three small ubiquitin-like modifiers, SUMO-1, SUMO-2, and SUMO-3. Mature SUMO-2 and SUMO-3 are nearly identical and contain an internal consensus site for sumoylation that is missing in SUMO-1. Combining state-of-the-art mass spectrometry with an "in vitro to in vivo" strategy for post-translational modifications, we provide direct evidence that SUMO-1, SUMO-2, and SUMO-3 form mixed chains in cells via the internal consensus sites for sumoylation in SUMO-2 and SUMO-3. In vitro, the chain length of SUMO polymers could be influenced by changing the relative amounts of SUMO-1 and SUMO-2. The developed methodology is generic and can be adapted for the identification of other sumoylation sites in complex samples.
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pubmed:grant |
|
pubmed:language |
eng
|
pubmed:journal |
|
pubmed:citationSubset |
IM
|
pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Cell Extracts,
http://linkedlifedata.com/resource/pubmed/chemical/HIF1A protein, human,
http://linkedlifedata.com/resource/pubmed/chemical/Hypoxia-Inducible Factor 1, alpha...,
http://linkedlifedata.com/resource/pubmed/chemical/Peptides,
http://linkedlifedata.com/resource/pubmed/chemical/Polymers,
http://linkedlifedata.com/resource/pubmed/chemical/SUMO-1 Protein,
http://linkedlifedata.com/resource/pubmed/chemical/SUMO2 protein, human,
http://linkedlifedata.com/resource/pubmed/chemical/SUMO3 protein, human,
http://linkedlifedata.com/resource/pubmed/chemical/Small Ubiquitin-Related Modifier...,
http://linkedlifedata.com/resource/pubmed/chemical/Ubiquitins
|
pubmed:status |
MEDLINE
|
pubmed:month |
Jan
|
pubmed:issn |
1535-9476
|
pubmed:author |
|
pubmed:issnType |
Print
|
pubmed:volume |
7
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
132-44
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pubmed:meshHeading |
pubmed-meshheading:17938407-Amino Acid Sequence,
pubmed-meshheading:17938407-Cell Extracts,
pubmed-meshheading:17938407-Cell Nucleus,
pubmed-meshheading:17938407-HeLa Cells,
pubmed-meshheading:17938407-Humans,
pubmed-meshheading:17938407-Hypoxia-Inducible Factor 1, alpha Subunit,
pubmed-meshheading:17938407-Mass Spectrometry,
pubmed-meshheading:17938407-Molecular Sequence Data,
pubmed-meshheading:17938407-Peptides,
pubmed-meshheading:17938407-Polymers,
pubmed-meshheading:17938407-SUMO-1 Protein,
pubmed-meshheading:17938407-Small Ubiquitin-Related Modifier Proteins,
pubmed-meshheading:17938407-Ubiquitins
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pubmed:year |
2008
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pubmed:articleTitle |
In vivo identification of human small ubiquitin-like modifier polymerization sites by high accuracy mass spectrometry and an in vitro to in vivo strategy.
|
pubmed:affiliation |
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Am Klopferspitz 18, D-82152 Martinsried, Germany.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
|