Source:http://linkedlifedata.com/resource/pubmed/id/17692974
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
3
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pubmed:dateCreated |
2007-8-28
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pubmed:abstractText |
Retrotransposon(-like) sequences in Aspergillus fumigatus have been used as typing targets through restriction fragment length polymorphism (RFLP)/Southern blotting approaches. Differences in fingerprints between unrelated isolates are the result of variations in copy-number and differences in the regions flanking the retrotransposon elements. Here, we present retrotransposon insertion-site context (RISC) typing as a novel and convenient PCR-based typing alternative to the RFLP approach. RISC typing aims at amplifying the sequences flanking the retrotransposon-like sequences in A. fumigatus and allows large numbers of isolates to be analyzed in a timely fashion with excellent discriminatory power.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Sep
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pubmed:issn |
0167-7012
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
70
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
528-34
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pubmed:meshHeading |
pubmed-meshheading:17692974-Aspergillosis,
pubmed-meshheading:17692974-Aspergillus fumigatus,
pubmed-meshheading:17692974-Bacterial Typing Techniques,
pubmed-meshheading:17692974-Base Sequence,
pubmed-meshheading:17692974-DNA Fingerprinting,
pubmed-meshheading:17692974-Humans,
pubmed-meshheading:17692974-Molecular Sequence Data,
pubmed-meshheading:17692974-Polymerase Chain Reaction,
pubmed-meshheading:17692974-Polymorphism, Restriction Fragment Length,
pubmed-meshheading:17692974-Retroelements
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pubmed:year |
2007
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pubmed:articleTitle |
Retrotransposon insertion-site context (RISC) typing: a novel typing method for Aspergillus fumigatus and a convenient PCR alternative to restriction fragment length polymorphism analysis.
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pubmed:affiliation |
Department of Medical Microbiology and Infectious Diseases, Canisius Wilhelmina Hospital, Weg door Jonkerbos 100, 6532 SZ Nijmegen, The Netherlands.
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pubmed:publicationType |
Journal Article
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