Source:http://linkedlifedata.com/resource/pubmed/id/17662553
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1
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pubmed:dateCreated |
2007-9-18
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pubmed:abstractText |
Sequence analysis provides a valuable alternative to phenotypic identification of moulds, especially for isolates lacking characteristic morphology. In this comparative prospective study, isolates that could not be identified by standard phenotypic criteria within 5 days (n = 244) were subjected to sequence analysis and further in-depth phenotypic investigations. Comparison of sequence-based with extended phenotypic identification revealed that sequence analysis was more precise in 52.0% of the isolates; in 38.6% of the isolates, both methods gave concordant results. The construction of a database consisting of high-quality sequences allowed improvement of sequence-based identification. Based on these results, we propose a diagnostic algorithm for the effective use of both phenotypic and genetic procedures for identification of moulds in the diagnostic laboratory.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:status |
MEDLINE
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pubmed:month |
Sep
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pubmed:issn |
0732-8893
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
59
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
49-60
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pubmed:meshHeading |
pubmed-meshheading:17662553-Algorithms,
pubmed-meshheading:17662553-Database Management Systems,
pubmed-meshheading:17662553-Databases, Genetic,
pubmed-meshheading:17662553-Fungi,
pubmed-meshheading:17662553-Humans,
pubmed-meshheading:17662553-Microbiological Techniques,
pubmed-meshheading:17662553-Mycoses,
pubmed-meshheading:17662553-Phenotype
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pubmed:year |
2007
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pubmed:articleTitle |
Identification of moulds in the diagnostic laboratory--an algorithm implementing molecular and phenotypic methods.
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pubmed:affiliation |
Institut für Medizinische Mikrobiologie, Universität Zürich, 8006 Zürich, Switzerland. dciardo@immv.unizh.ch
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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