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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
8
pubmed:dateCreated
2007-7-30
pubmed:abstractText
Much of the variation in inherited risk of colorectal cancer (CRC) is probably due to combinations of common low risk variants. We conducted a genome-wide association study of 550,000 tag SNPs in 930 familial colorectal tumor cases and 960 controls. The most strongly associated SNP (P = 1.72 x 10(-7), allelic test) was rs6983267 at 8q24.21. To validate this finding, we genotyped rs6983267 in three additional CRC case-control series (4,361 affected individuals and 3,752 controls; 1,901 affected individuals and 1,079 controls; 1,072 affected individuals and 415 controls) and replicated the association, providing P = 1.27 x 10(-14) (allelic test) overall, with odds ratios (ORs) of 1.27 (95% confidence interval (c.i.): 1.16-1.39) and 1.47 (95% c.i.: 1.34-1.62) for heterozygotes and rare homozygotes, respectively. Analyses based on 1,477 individuals with colorectal adenoma and 2,136 controls suggest that susceptibility to CRC is mediated through development of adenomas (OR = 1.21, 95% c.i.: 1.10-1.34; P = 6.89 x 10(-5)). These data show that common, low-penetrance susceptibility alleles predispose to colorectal neoplasia.
pubmed:commentsCorrections
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:status
MEDLINE
pubmed:month
Aug
pubmed:issn
1061-4036
pubmed:author
pubmed-author:AtkinWendyW, pubmed-author:BainsAA, pubmed-author:BarclayEllaE, pubmed-author:BroderickPeterP, pubmed-author:CORGI Consortium, pubmed-author:Carvajal-CarmonaLuisL, pubmed-author:CazierJean-BaptisteJB, pubmed-author:ChandlerIanI, pubmed-author:FieldingSarahS, pubmed-author:GormanMaggieM, pubmed-author:GrayRichardR, pubmed-author:HoulstonRichardR, pubmed-author:HowarthKimberleyK, pubmed-author:HubnerRichardR, pubmed-author:IvekLjLj, pubmed-author:JaegerEmmaE, pubmed-author:JohnstoneElaineE, pubmed-author:LoganRichardR, pubmed-author:LubbeStevenS, pubmed-author:MartinLynnL, pubmed-author:MuirKennethK, pubmed-author:PenegarStevenS, pubmed-author:PetoJulianJ, pubmed-author:RowanAndrewA, pubmed-author:SellickGabrielleG, pubmed-author:SieberOliverO, pubmed-author:SilverAndrewA, pubmed-author:SpainSarahS, pubmed-author:ThomasHuwH, pubmed-author:TomlinsonIanI, pubmed-author:WebbEmilyE, pubmed-author:WildRuthR, pubmed-author:WoodWendyW
pubmed:issnType
Print
pubmed:volume
39
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
984-8
pubmed:dateRevised
2008-1-2
pubmed:meshHeading
pubmed:year
2007
pubmed:articleTitle
A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q24.21.
pubmed:affiliation
Molecular and Population Genetics Laboratory, Cancer Research UK, London WC2A 3PX, UK. ian.tomlinson@cancer.org.uk
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't