Linked Life Data

17599822

Source:http://linkedlifedata.com/resource/pubmed/id/17599822

Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
12
pubmed:dateCreated
2007-10-22
pubmed:abstractText
Nearest neighbour algorithm is applied to discriminating homo-oligomeric proteins from the protein primary structure. The algorithm describes protein primary sequences by their subsequence distributions, therefore, the information of protein sequences is sufficiently taken into account. When the length of subsequence increases, all performance measures have the tendency to ascend quickly for the tests of the method on the three data sets. Our tests demonstrate that the residue order along protein sequences plays an important role in recognition of the homo-oligomers, and nearest neighbour algorithm method is a simple and effective tool for classification of homo-oligomeric proteins. It is further confirmed that protein primary sequence encodes quaternary structure information.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
0010-4825
pubmed:author
pubmed:issnType
Print
pubmed:volume
37
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1759-64
pubmed:meshHeading
pubmed:year
2007
pubmed:articleTitle
Prediction of homo-oligomeric proteins based on nearest neighbour algorithm.
pubmed:affiliation
Department of Mathematics, Shaoguan University, Shaoguan 512005, People's Republic of China. jiesong@sgu.edu.cn
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't, Evaluation Studies