Source:http://linkedlifedata.com/resource/pubmed/id/17575345
Switch to
Predicate | Object |
---|---|
rdf:type | |
lifeskim:mentions | |
pubmed:issue |
6
|
pubmed:dateCreated |
2007-6-18
|
pubmed:abstractText |
Ferrocenylcarbodiimide (1), which is known to react with a guanine (G) or thymine (T) base of single stranded DNA, was allowed to react with DNA duplex having a single mismatched base pair of G-T, T-T, or T-cytosine (C). Electrophoreograms of the reaction mixture showed that 1 could react with G or T base of the mismatched sites on the DNA duplex. However, 1 also reacted with the G base of the terminal site on the DNA duplex. This showed that 1 can react with an unpaired base or unstable base pair such as a terminal or mismatched base on the DNA duplex. Electrochemical mismatch detection could be achieved after hybridization of the ferrocenylated mismatched DNA duplex with a selected DNA probe-immobilized electrode. These results revealed that 1 has a potentiality of serving as a labeling reagent of mismatched bases on the DNA duplex, which is important in the search for heterozygous single nucleotide polymorphisms (SNPs).
|
pubmed:language |
eng
|
pubmed:journal | |
pubmed:citationSubset |
IM
|
pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Carbodiimides,
http://linkedlifedata.com/resource/pubmed/chemical/DNA,
http://linkedlifedata.com/resource/pubmed/chemical/DNA Probes,
http://linkedlifedata.com/resource/pubmed/chemical/Ferrous Compounds,
http://linkedlifedata.com/resource/pubmed/chemical/ferrocenyl carbodiimide
|
pubmed:status |
MEDLINE
|
pubmed:month |
Jun
|
pubmed:issn |
0910-6340
|
pubmed:author | |
pubmed:issnType |
Print
|
pubmed:volume |
23
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
645-9
|
pubmed:meshHeading |
pubmed-meshheading:17575345-Base Pair Mismatch,
pubmed-meshheading:17575345-Base Sequence,
pubmed-meshheading:17575345-Biosensing Techniques,
pubmed-meshheading:17575345-Carbodiimides,
pubmed-meshheading:17575345-DNA,
pubmed-meshheading:17575345-DNA Probes,
pubmed-meshheading:17575345-Electrochemistry,
pubmed-meshheading:17575345-Electrophoresis,
pubmed-meshheading:17575345-Ferrous Compounds,
pubmed-meshheading:17575345-Polymorphism, Single Nucleotide,
pubmed-meshheading:17575345-Transition Temperature
|
pubmed:year |
2007
|
pubmed:articleTitle |
Reactivity of ferrocenylcarbodiimide with DNA duplex containing single-mismatched base pairs.
|
pubmed:affiliation |
Department of Applied Chemistry, Faculty of Engineering, Kyushu University, Japan.
|
pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
|