Source:http://linkedlifedata.com/resource/pubmed/id/17459961
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
13
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pubmed:dateCreated |
2007-7-24
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pubmed:abstractText |
Structural RNA genes exhibit unique evolutionary patterns that are designed to conserve their secondary structures; these patterns should be taken into account while constructing accurate multiple alignments of RNA genes. The Sankoff algorithm is a natural alignment algorithm that includes the effect of base-pair covariation in the alignment model. However, the extremely high computational cost of the Sankoff algorithm precludes its application to most RNA sequences.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Jul
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pubmed:issn |
1367-4811
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:day |
1
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pubmed:volume |
23
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
1588-98
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pubmed:dateRevised |
2009-11-4
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pubmed:meshHeading |
pubmed-meshheading:17459961-Algorithms,
pubmed-meshheading:17459961-Base Sequence,
pubmed-meshheading:17459961-Molecular Sequence Data,
pubmed-meshheading:17459961-RNA,
pubmed-meshheading:17459961-Sequence Alignment,
pubmed-meshheading:17459961-Sequence Analysis, RNA,
pubmed-meshheading:17459961-Software
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pubmed:year |
2007
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pubmed:articleTitle |
Murlet: a practical multiple alignment tool for structural RNA sequences.
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pubmed:affiliation |
Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology, 2-42 Aomi, Koto-ku, Tokyo 135-0064, Japan. kiryu-h@aist.go.jp
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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