Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
17
pubmed:dateCreated
2007-4-24
pubmed:abstractText
The X-ray crystal structures of human purine nucleoside phosphorylase (PNP) with bound inosine or transition-state analogues show His257 within hydrogen bonding distance of the 5'-hydroxyl. The mutants His257Phe, His257Gly, and His257Asp exhibited greatly decreased affinity for Immucillin-H (ImmH), binding this mimic of an early transition state as much as 370-fold (Km/Ki) less tightly than native PNP. In contrast, these mutants bound DADMe-ImmH, a mimic of a late transition state, nearly as well as the native enzyme. These results indicate that His257 serves an important role in the early stages of transition-state formation. Whereas mutation of His257 resulted in little variation in the PNP x DADMe-ImmH x SO4 structures, His257Phe x ImmH x PO4 showed distortion at the 5'-hydroxyl, indicating the importance of H-bonding in positioning this group during progression to the transition state. Binding isotope effect (BIE) and kinetic isotope effect (KIE) studies of the remote 5'-(3)H for the arsenolysis of inosine with native PNP revealed a BIE of 1.5% and an unexpectedly large intrinsic KIE of 4.6%. This result is interpreted as a moderate electronic distortion toward the transition state in the Michaelis complex with continued development of a similar distortion at the transition state. The mutants His257Phe, His257Gly, and His257Asp altered the 5'-(3)H intrinsic KIE to -3, -14, and 7%, respectively, while the BIEs contributed 2, 2, and -2%, respectively. These surprising results establish that forces in the Michaelis complex, reported by the BIEs, can be reversed or enhanced at the transition state.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-10507010, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-11170405, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-11743878, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-12696897, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-12755607, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-12924955, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-14613329, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-14706628, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-14756556, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-14769022, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-14982453, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-15174854, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-15299926, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-15571394, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-15572765, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-15581562, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-15749708, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-16914160, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-2525926, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-3281418, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-3841179, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-3929070, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-413564, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-4708382, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-5419047, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-5651328, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-6766310, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-7023356, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-7827065, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-8241176, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-9109661, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-9305962, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-931993, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-9628722, http://linkedlifedata.com/resource/pubmed/commentcorrection/17407325-9757107
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0006-2960
pubmed:author
pubmed:issnType
Print
pubmed:day
1
pubmed:volume
46
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
5038-49
pubmed:dateRevised
2011-9-26
pubmed:meshHeading
pubmed:year
2007
pubmed:articleTitle
Neighboring group participation in the transition state of human purine nucleoside phosphorylase.
pubmed:affiliation
Department of Biochemistry, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, New York 10461, USA.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't, Research Support, N.I.H., Extramural