Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
2
pubmed:dateCreated
2007-4-18
pubmed:databankReference
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336570, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336571, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336572, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336573, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336574, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336575, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336576, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336577, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336578, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336579, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336580, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336581, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336582, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336583, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336584, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336585, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336586, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336587, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336588, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336589, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336590, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336591, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336592, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336593, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336594, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336595, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336596, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336597, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336598, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336599, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336600, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336601, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336602, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336603, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336604, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336605, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ336606
pubmed:abstractText
At Department of Energy Site 300, beneficial hydrocarbon cocontaminants and favorable subsurface conditions facilitate sequential reductive dechlorination of trichloroethene (TCE) and rapid oxidation of the resultant cis-dichloroethene (cis-DCE) upon periodic oxygen influx. We assessed the geochemistry and microbial community of groundwater from across the site. Removal of cis-DCE was shown to coincide with oxygen influx in hydrocarbon-containing groundwater near the source area. Principal component analysis of contaminants and inorganic compounds showed that monitoring wells could be differentiated based upon concentrations of TCE, cis-DCE, and nitrate. Structurally similar communities were detected in groundwater from wells containing cis-DCE, high TCE, and low nitrate levels. Bacteria identified by sequencing 16S rRNA genes belonged to seven phylogenetic groups, including Alpha-, Beta-, Gamma- and Deltaproteobacteria, Nitrospira, Firmicutes and Cytophaga-Flexibacter-Bacteroidetes (CFB). Whereas members of the Burkholderiales and CFB group were abundant in all wells (10(4)-10(9) 16S rRNA gene copies L(-1)), quantitative PCR showed that Alphaproteobacteria were elevated (>10(6) L(-1)) only in wells containing hydrocarbon cocontaminants. The study shows that bacterial community structure is related to groundwater geochemistry and that Alphaproteobacteria are enriched in locales where cis-DCE removal occurs.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0168-6496
pubmed:author
pubmed:issnType
Print
pubmed:volume
60
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
299-311
pubmed:meshHeading
pubmed-meshheading:17386036-Aerobiosis, pubmed-meshheading:17386036-Anaerobiosis, pubmed-meshheading:17386036-Bacteria, pubmed-meshheading:17386036-Biodegradation, Environmental, pubmed-meshheading:17386036-California, pubmed-meshheading:17386036-DNA, Bacterial, pubmed-meshheading:17386036-Dichloroethylenes, pubmed-meshheading:17386036-Ecosystem, pubmed-meshheading:17386036-Electrophoresis, pubmed-meshheading:17386036-Fresh Water, pubmed-meshheading:17386036-Gas Chromatography-Mass Spectrometry, pubmed-meshheading:17386036-Geography, pubmed-meshheading:17386036-Hydrocarbons, Chlorinated, pubmed-meshheading:17386036-Molecular Sequence Data, pubmed-meshheading:17386036-Nitrates, pubmed-meshheading:17386036-Oxygen, pubmed-meshheading:17386036-Phylogeny, pubmed-meshheading:17386036-Polymerase Chain Reaction, pubmed-meshheading:17386036-Principal Component Analysis, pubmed-meshheading:17386036-RNA, Ribosomal, 16S, pubmed-meshheading:17386036-Sequence Analysis, DNA, pubmed-meshheading:17386036-Trichloroethylene, pubmed-meshheading:17386036-Water Microbiology, pubmed-meshheading:17386036-Water Pollutants, Chemical
pubmed:year
2007
pubmed:articleTitle
Bacterial community analysis of shallow groundwater undergoing sequential anaerobic and aerobic chloroethene biotransformation.
pubmed:affiliation
Department of Environmental Health Sciences, Center for Water and Health, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S.