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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
4
pubmed:dateCreated
2007-3-26
pubmed:abstractText
Synovial Sarcoma consistently harbors t(X;18) resulting in SS18-SSX1, SS18-SSX2 and rarely SS18-SSX4 fusion transcripts. Of 328 cases included in our study, synovial sarcoma was either the primary diagnosis or was very high in the differential diagnosis in 134 cases: of these, amplifiable cDNA was obtained from 131. SS18-SSX fusion products were found in 126 (96%) cases (74 SS18-SSX1, 52 SS18-SSX2), using quantitative and 120 by conventional reverse transcriptase-polymerase chain reaction (RT-PCR). One hundred and one cases in a tissue microarray, analyzed by fluorescence in situ hybridization (FISH), revealed that 87 (86%) showed SS18 rearrangement: four RT-PCR positive cases, reported as negative for FISH, showed loss of one spectrum green signal, and 15 cases had multiple copies of the SS18 gene: both findings are potentially problematic when interpreting results. One of three cases, not analyzed by RT-PCR reaction owing to poor quality RNA, was positive by FISH. SS18-SSX1 was present in 56 monophasic and 18 biphasic synovial sarcoma: SS18-SSX2 was detected in 41 monophasic and 11 biphasic synovial sarcoma. Poorly differentiated areas were identified in 44 cases (31%). There was no statistically significant association between biphasic, monophasic and fusion type. Five cases were negative for SS18 rearrangement by all methods, three of which were pleural-sited neoplasms. Following clinical input, a diagnosis of mesothelioma was favored in one case, a sarcoma, not otherwise specified in another and a solitary fibrous tumor in the third case. The possibility of a malignant peripheral nerve sheath tumor could not be excluded in the other two cases. We concluded that the employment of a combination of molecular approaches is a powerful aid to diagnosing synovial sarcoma giving at least 96% sensitivity and 100% specificity but results must be interpreted in the light of other modalities such as clinical findings and immunohistochemical data.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/Antigens, Neoplasm, http://linkedlifedata.com/resource/pubmed/chemical/Formaldehyde, http://linkedlifedata.com/resource/pubmed/chemical/Neoplasm Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Oncogene Proteins, Fusion, http://linkedlifedata.com/resource/pubmed/chemical/Proto-Oncogene Proteins, http://linkedlifedata.com/resource/pubmed/chemical/RNA, Messenger, http://linkedlifedata.com/resource/pubmed/chemical/Recombinant Fusion Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Repressor Proteins, http://linkedlifedata.com/resource/pubmed/chemical/SS18 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/SYT-SSX fusion protein, http://linkedlifedata.com/resource/pubmed/chemical/Tumor Markers, Biological, http://linkedlifedata.com/resource/pubmed/chemical/synovial sarcoma X breakpoint...
pubmed:status
MEDLINE
pubmed:month
Apr
pubmed:issn
0893-3952
pubmed:author
pubmed:issnType
Print
pubmed:volume
20
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
482-96
pubmed:meshHeading
pubmed-meshheading:17334349-Adolescent, pubmed-meshheading:17334349-Adult, pubmed-meshheading:17334349-Aged, pubmed-meshheading:17334349-Aged, 80 and over, pubmed-meshheading:17334349-Antigens, Neoplasm, pubmed-meshheading:17334349-Child, pubmed-meshheading:17334349-Child, Preschool, pubmed-meshheading:17334349-Female, pubmed-meshheading:17334349-Formaldehyde, pubmed-meshheading:17334349-Humans, pubmed-meshheading:17334349-Immunohistochemistry, pubmed-meshheading:17334349-Male, pubmed-meshheading:17334349-Middle Aged, pubmed-meshheading:17334349-Neoplasm Proteins, pubmed-meshheading:17334349-Oncogene Proteins, Fusion, pubmed-meshheading:17334349-Paraffin Embedding, pubmed-meshheading:17334349-Proto-Oncogene Proteins, pubmed-meshheading:17334349-RNA, Messenger, pubmed-meshheading:17334349-Recombinant Fusion Proteins, pubmed-meshheading:17334349-Repressor Proteins, pubmed-meshheading:17334349-Reverse Transcriptase Polymerase Chain Reaction, pubmed-meshheading:17334349-Sarcoma, Synovial, pubmed-meshheading:17334349-Soft Tissue Neoplasms, pubmed-meshheading:17334349-Tissue Array Analysis, pubmed-meshheading:17334349-Tissue Fixation, pubmed-meshheading:17334349-Tumor Markers, Biological
pubmed:year
2007
pubmed:articleTitle
Detection of SS18-SSX fusion transcripts in formalin-fixed paraffin-embedded neoplasms: analysis of conventional RT-PCR, qRT-PCR and dual color FISH as diagnostic tools for synovial sarcoma.
pubmed:affiliation
Santa Casa School of Medical Sciences and University of Sao Paulo, Sao Paulo, Brazil.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't