Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
6
pubmed:dateCreated
2007-3-26
pubmed:abstractText
Histone methylation regulates chromatin structure and transcription. The recently identified histone demethylase lysine-specific demethylase 1 (LSD1) is chemically restricted to demethylation of only mono- and di- but not trimethylated histone H3 lysine 4 (H3K4me3). We show that the X-linked mental retardation (XLMR) gene SMCX (JARID1C), which encodes a JmjC-domain protein, reversed H3K4me3 to di- and mono- but not unmethylated products. Other SMCX family members, including SMCY, RBP2, and PLU-1, also demethylated H3K4me3. SMCX bound H3K9me3 via its N-terminal PHD (plant homeodomain) finger, which may help coordinate H3K4 demethylation and H3K9 methylation in transcriptional repression. Significantly, several XLMR-patient point mutations reduced SMCX demethylase activity and binding to H3K9me3 peptides, respectively. Importantly, studies in zebrafish and primary mammalian neurons demonstrated a role for SMCX in neuronal survival and dendritic development and a link to the demethylase activity. Our findings thus identify a family of H3K4me3 demethylases and uncover a critical link between histone modifications and XLMR.
pubmed:grant
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/DNA, Complementary, http://linkedlifedata.com/resource/pubmed/chemical/DNA-Binding Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Histone Demethylases, http://linkedlifedata.com/resource/pubmed/chemical/Histone-Lysine N-Methyltransferase, http://linkedlifedata.com/resource/pubmed/chemical/Histones, http://linkedlifedata.com/resource/pubmed/chemical/Intracellular Signaling Peptides..., http://linkedlifedata.com/resource/pubmed/chemical/JARID1C protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Jumonji Domain-Containing Histone..., http://linkedlifedata.com/resource/pubmed/chemical/KDM5A protein, human, http://linkedlifedata.com/resource/pubmed/chemical/KDM5D protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Kdm5b protein, mouse, http://linkedlifedata.com/resource/pubmed/chemical/Lysine, http://linkedlifedata.com/resource/pubmed/chemical/Neoplasm Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Oxidoreductases, N-Demethylating, http://linkedlifedata.com/resource/pubmed/chemical/Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Retinoblastoma-Binding Protein 2, http://linkedlifedata.com/resource/pubmed/chemical/Tumor Suppressor Proteins
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
0092-8674
pubmed:author
pubmed:issnType
Print
pubmed:day
23
pubmed:volume
128
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1077-88
pubmed:dateRevised
2011-11-17
pubmed:meshHeading
pubmed-meshheading:17320160-Animals, pubmed-meshheading:17320160-Cell Line, Tumor, pubmed-meshheading:17320160-Cell Survival, pubmed-meshheading:17320160-DNA, Complementary, pubmed-meshheading:17320160-DNA-Binding Proteins, pubmed-meshheading:17320160-Gene Library, pubmed-meshheading:17320160-Histone Demethylases, pubmed-meshheading:17320160-Histone-Lysine N-Methyltransferase, pubmed-meshheading:17320160-Histones, pubmed-meshheading:17320160-Humans, pubmed-meshheading:17320160-Intracellular Signaling Peptides and Proteins, pubmed-meshheading:17320160-Jumonji Domain-Containing Histone Demethylases, pubmed-meshheading:17320160-Lysine, pubmed-meshheading:17320160-Mental Retardation, X-Linked, pubmed-meshheading:17320160-Methylation, pubmed-meshheading:17320160-Mice, pubmed-meshheading:17320160-Neoplasm Proteins, pubmed-meshheading:17320160-Neurons, pubmed-meshheading:17320160-Oxidoreductases, N-Demethylating, pubmed-meshheading:17320160-Proteins, pubmed-meshheading:17320160-Retinoblastoma-Binding Protein 2, pubmed-meshheading:17320160-Tumor Suppressor Proteins
pubmed:year
2007
pubmed:articleTitle
The X-linked mental retardation gene SMCX/JARID1C defines a family of histone H3 lysine 4 demethylases.
pubmed:affiliation
Department of Pathology, Harvard Medical School, Boston, MA 02115, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S., Research Support, Non-U.S. Gov't, Research Support, N.I.H., Extramural