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PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
3
pubmed:dateCreated
2007-2-2
pubmed:databankReference
pubmed:abstractText
X-linked dystonia-parkinsonism (XDP) is a movement disorder endemic to the Philippines. The disease locus, DYT3, has been mapped to Xq13.1. In a search for the causative gene, we performed genomic sequencing analysis, followed by expression analysis of XDP brain tissues. We found a disease-specific SVA (short interspersed nuclear element, variable number of tandem repeats, and Alu composite) retrotransposon insertion in an intron of the TATA-binding protein-associated factor 1 gene (TAF1), which encodes the largest component of the TFIID complex, and significantly decreased expression levels of TAF1 and the dopamine receptor D2 gene (DRD2) in the caudate nucleus. We also identified an abnormal pattern of DNA methylation in the retrotransposon in the genome from the patient's caudate, which could account for decreased expression of TAF1. Our findings suggest that the reduced neuron-specific expression of the TAF1 gene is associated with XDP.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-10192391, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-10493831, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-11448935, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-11686293, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-11724910, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-11988536, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-12417523, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-12509424, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-12928496, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-14517542, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-14628287, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-15912496, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-1620119, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-1672807, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-17668393, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-2747648, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-3240859, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-6277502, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-6409417, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-7587084, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-7668293, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-7680771, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-7892602, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-8125298, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-8132574, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-8341310, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-8450888, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-941767, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-9462738, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-9690476, http://linkedlifedata.com/resource/pubmed/commentcorrection/17273961-9750897
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
0002-9297
pubmed:author
pubmed:issnType
Print
pubmed:volume
80
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
393-406
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:17273961-Humans, pubmed-meshheading:17273961-Dystonia, pubmed-meshheading:17273961-Neurons, pubmed-meshheading:17273961-Parkinsonian Disorders, pubmed-meshheading:17273961-Female, pubmed-meshheading:17273961-DNA, pubmed-meshheading:17273961-Male, pubmed-meshheading:17273961-Adult, pubmed-meshheading:17273961-Middle Aged, pubmed-meshheading:17273961-Pedigree, pubmed-meshheading:17273961-RNA, Messenger, pubmed-meshheading:17273961-Case-Control Studies, pubmed-meshheading:17273961-Molecular Sequence Data, pubmed-meshheading:17273961-Chromosomes, Human, X, pubmed-meshheading:17273961-Repetitive Sequences, Nucleic Acid, pubmed-meshheading:17273961-Down-Regulation, pubmed-meshheading:17273961-Immunoenzyme Techniques, pubmed-meshheading:17273961-Genes, X-Linked, pubmed-meshheading:17273961-Blotting, Northern, pubmed-meshheading:17273961-Tandem Repeat Sequences, pubmed-meshheading:17273961-TATA Box, pubmed-meshheading:17273961-Transcription Factor TFIID, pubmed-meshheading:17273961-TATA-Binding Protein Associated Factors, pubmed-meshheading:17273961-Reverse Transcriptase Polymerase Chain Reaction
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