Source:http://linkedlifedata.com/resource/pubmed/id/17234642
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
6
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pubmed:dateCreated |
2007-4-4
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pubmed:abstractText |
We describe a general multiplatform exploratory tool called TreeQ-Vista, designed for presenting functional annotations in a phylogenetic context. Traits, such as phenotypic and genomic properties, are interactively queried from a user-provided relational database with a user-friendly interface which provides a set of tools for users with or without SQL knowledge. The query results are projected onto a phylogenetic tree and can be displayed in multiple color groups. A rich set of browsing, grouping and query tools are provided to facilitate trait exploration, comparison and analysis. AVAILABILITY: The program, detailed tutorial and examples are available online (http:/genome.lbl.gov/vista/TreeQVista).
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:status |
MEDLINE
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pubmed:month |
Mar
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pubmed:issn |
1367-4811
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pubmed:author | |
pubmed:issnType |
Electronic
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pubmed:day |
15
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pubmed:volume |
23
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
764-6
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pubmed:dateRevised |
2009-11-4
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pubmed:meshHeading |
pubmed-meshheading:17234642-Chromosome Mapping,
pubmed-meshheading:17234642-Computer Graphics,
pubmed-meshheading:17234642-Computer Simulation,
pubmed-meshheading:17234642-Database Management Systems,
pubmed-meshheading:17234642-Databases, Genetic,
pubmed-meshheading:17234642-Evolution, Molecular,
pubmed-meshheading:17234642-Information Storage and Retrieval,
pubmed-meshheading:17234642-Models, Genetic,
pubmed-meshheading:17234642-Phylogeny,
pubmed-meshheading:17234642-Software,
pubmed-meshheading:17234642-User-Computer Interface
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pubmed:year |
2007
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pubmed:articleTitle |
TreeQ-VISTA: an interactive tree visualization tool with functional annotation query capabilities.
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pubmed:affiliation |
Institute for Data Analysis and Visualization (IDAV), Department of Computer Science, University of California, Davis, One Shields Ave., Davis, CA 95616, USA.
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, Non-P.H.S.,
Evaluation Studies
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