Source:http://linkedlifedata.com/resource/pubmed/id/17220459
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
Pt 1
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pubmed:dateCreated |
2007-1-15
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pubmed:databankReference | |
pubmed:abstractText |
A Gram-negative, non-motile, rod-shaped bacterium, strain SS011B1-20(T), was isolated from sediments of the South China Sea. Growth occurred at NaCl concentrations between 0 and 10 % and at temperatures between 10 and 37 degrees C. Strain SS011B1-20(T) contained Q-10 as the major respiratory quinone and C(18 : 1)omega7c (81.2 %), C(16 : 0) (7.0 %) and C(18 : 1) methyl (4.3 %) as the predominant fatty acids. The G+C content of the genomic DNA was 64.7 mol%. A phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain SS011B1-20(T) belonged to a clade within the genus Oceanicola in the Alphaproteobacteria, the highest sequence similarities being found with respect to Oceanicola batsensis (96.3 %) and with Oceanicola granulosus (94.9 %). Strain SS011B1-20(T) could be clearly distinguished from other Oceanicola species on the basis of the genotypic, phenotypic and phylogenetic data. Thus, it is proposed that strain SS011B1-20(T) represents a novel species of the genus Oceanicola, with the name Oceanicola nanhaiensis sp. nov. The type strain is SS011B1-20(T) (=LMG 23508(T)=CGMCC 1.6293(T)).
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Jan
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pubmed:issn |
1466-5026
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
57
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
157-60
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pubmed:meshHeading |
pubmed-meshheading:17220459-Alphaproteobacteria,
pubmed-meshheading:17220459-Bacterial Typing Techniques,
pubmed-meshheading:17220459-Base Composition,
pubmed-meshheading:17220459-China,
pubmed-meshheading:17220459-DNA, Bacterial,
pubmed-meshheading:17220459-DNA, Ribosomal,
pubmed-meshheading:17220459-Fatty Acids,
pubmed-meshheading:17220459-Genes, rRNA,
pubmed-meshheading:17220459-Genotype,
pubmed-meshheading:17220459-Geologic Sediments,
pubmed-meshheading:17220459-Molecular Sequence Data,
pubmed-meshheading:17220459-Phenotype,
pubmed-meshheading:17220459-Phylogeny,
pubmed-meshheading:17220459-RNA, Ribosomal, 16S,
pubmed-meshheading:17220459-Seawater,
pubmed-meshheading:17220459-Sequence Analysis, DNA
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pubmed:year |
2007
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pubmed:articleTitle |
Oceanicola nanhaiensis sp. nov., isolated from sediments of the South China Sea.
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pubmed:affiliation |
Department of Environmental Science and Engineering, Tsinghua University, Beijing 100084, People's Republic of China.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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