Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
12
pubmed:dateCreated
2006-11-1
pubmed:abstractText
In breast cancer, the determination of estrogen receptor (ER) expression is crucial for the decision on therapeutic strategies. Current ER expression analysis is based on immunohistochemical (IHC) staining of ER on formalin fixed tissue sections. However, low levels of ER expression frequently escape detection because of varying sensitivities of routine histopathological laboratories. Moreover, in estimating ER by IHC the receptor protein only is tested instead of the complex underlying ER pathway, which reflects its biological activity. To overcome this limitation, we have used the microarray technology to study 56 samples of invasive ductal carcinoma. We infer a robust and reliable signature of 10 genes, which is associated with ER expression and presumably therapeutically relevant biological processes. In a meta-analysis, the signature was tested on 3 further independent microarray gene expression data sets, covering different laboratories, array platforms, and clinics. The classification based on the signature showed a very low misclassification rate. In summary, the expression of few genes is sufficient to determine ER status. Future decisions on antiestrogen based therapy in breast cancer could be based on this signature rather than on immunostaining alone.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
0020-7136
pubmed:author
pubmed:copyrightInfo
Copyright 2006 Wiley-Liss, Inc.
pubmed:issnType
Print
pubmed:day
15
pubmed:volume
119
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2974-9
pubmed:dateRevised
2007-7-24
pubmed:meshHeading
pubmed-meshheading:17019712-Adult, pubmed-meshheading:17019712-Aged, pubmed-meshheading:17019712-Aged, 80 and over, pubmed-meshheading:17019712-Breast Neoplasms, pubmed-meshheading:17019712-Carcinoma, Ductal, Breast, pubmed-meshheading:17019712-Cation Transport Proteins, pubmed-meshheading:17019712-Cluster Analysis, pubmed-meshheading:17019712-Female, pubmed-meshheading:17019712-GATA3 Transcription Factor, pubmed-meshheading:17019712-Gene Expression Profiling, pubmed-meshheading:17019712-Gene Expression Regulation, Neoplastic, pubmed-meshheading:17019712-Hepatocyte Nuclear Factor 3-alpha, pubmed-meshheading:17019712-Humans, pubmed-meshheading:17019712-Middle Aged, pubmed-meshheading:17019712-Neoplasm Proteins, pubmed-meshheading:17019712-Oligonucleotide Array Sequence Analysis, pubmed-meshheading:17019712-Receptors, Estrogen, pubmed-meshheading:17019712-Reproducibility of Results
pubmed:year
2006
pubmed:articleTitle
Identification and meta-analysis of a small gene expression signature for the diagnosis of estrogen receptor status in invasive ductal breast cancer.
pubmed:affiliation
Division of Molecular Genome Analysis, German Cancer Research Center, Heidelberg 69120, Germany.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't, Meta-Analysis