Source:http://linkedlifedata.com/resource/pubmed/id/16986322
Switch to
Predicate | Object |
---|---|
rdf:type | |
lifeskim:mentions | |
pubmed:issue |
5
|
pubmed:dateCreated |
2006-9-21
|
pubmed:abstractText |
In the post-genomic era, the biochemical information for individual compounds, enzymes, reactions to be found within named organisms has become readily available. The well-known KEGG and BioCyc databases provide a comprehensive catalogue for this information and have thereby substantially aided the scientific community. Using these databases, the complement of enzymes present in a given organism can be determined and, in principle, used to reconstruct the metabolic network. However, such reconstructed networks contain numerous properties contradicting biological expectation. The metabolic networks for a number of organisms are reconstructed from KEGG and BioCyc databases, and features of these networks are related to properties of their originating database.
|
pubmed:grant | |
pubmed:language |
eng
|
pubmed:journal | |
pubmed:citationSubset |
IM
|
pubmed:chemical | |
pubmed:status |
MEDLINE
|
pubmed:month |
Sep
|
pubmed:issn |
1741-2471
|
pubmed:author | |
pubmed:issnType |
Print
|
pubmed:volume |
153
|
pubmed:owner |
NLM
|
pubmed:authorsComplete |
Y
|
pubmed:pagination |
379-84
|
pubmed:dateRevised |
2009-11-16
|
pubmed:meshHeading |
pubmed-meshheading:16986322-Algorithms,
pubmed-meshheading:16986322-Animals,
pubmed-meshheading:16986322-Cell Physiological Phenomena,
pubmed-meshheading:16986322-Computer Simulation,
pubmed-meshheading:16986322-Database Management Systems,
pubmed-meshheading:16986322-Databases, Factual,
pubmed-meshheading:16986322-Humans,
pubmed-meshheading:16986322-Information Storage and Retrieval,
pubmed-meshheading:16986322-Kinetics,
pubmed-meshheading:16986322-Models, Biological,
pubmed-meshheading:16986322-Multienzyme Complexes,
pubmed-meshheading:16986322-Proteome,
pubmed-meshheading:16986322-Signal Transduction,
pubmed-meshheading:16986322-User-Computer Interface
|
pubmed:year |
2006
|
pubmed:articleTitle |
Challenges to be faced in the reconstruction of metabolic networks from public databases.
|
pubmed:affiliation |
School of Biology and Molecular Science, Oxford Brookes University, Oxford OX3 0BP, UK. mgpoolman@brookes.ac.uk
|
pubmed:publicationType |
Journal Article
|