Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
39
pubmed:dateCreated
2006-9-27
pubmed:databankReference
pubmed:abstractText
The unfolded protein response (UPR) is an evolutionarily conserved mechanism by which all eukaryotic cells adapt to the accumulation of unfolded proteins in the endoplasmic reticulum (ER). Inositol-requiring kinase 1 (IRE1) and PKR-related ER kinase (PERK) are two type I transmembrane ER-localized protein kinase receptors that signal the UPR through a process that involves homodimerization and autophosphorylation. To elucidate the molecular basis of the ER transmembrane signaling event, we determined the x-ray crystal structure of the luminal domain of human IRE1alpha. The monomer of the luminal domain comprises a unique fold of a triangular assembly of beta-sheet clusters. Structural analysis identified an extensive dimerization interface stabilized by hydrogen bonds and hydrophobic interactions. Dimerization creates an MHC-like groove at the interface. However, because this groove is too narrow for peptide binding and the purified luminal domain forms high-affinity dimers in vitro, peptide binding to this groove is not required for dimerization. Consistent with our structural observations, mutations that disrupt the dimerization interface produced IRE1alpha molecules that failed to either dimerize or activate the UPR upon ER stress. In addition, mutations in a structurally homologous region within PERK also prevented dimerization. Our structural, biochemical, and functional studies in vivo altogether demonstrate that IRE1 and PERK have conserved a common molecular interface necessary and sufficient for dimerization and UPR signaling.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-10835430, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-10854322, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-10964570, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-11069889, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-11343907, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-11779464, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-11779465, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-11780124, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-11850408, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-11897784, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-11907036, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-12142265, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-12438434, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-12586069, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-12637535, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-12808051, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-12839495, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-15520230, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-15952902, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-15954865, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-16005683, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-16365312, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-1758883, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-8358794, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-8513503, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-8670804, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-9020152, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-9113982, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-9399863, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-9755171, http://linkedlifedata.com/resource/pubmed/commentcorrection/16973740-9927721
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
0027-8424
pubmed:author
pubmed:issnType
Print
pubmed:day
26
pubmed:volume
103
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
14343-8
pubmed:dateRevised
2009-11-19
pubmed:meshHeading
pubmed-meshheading:16973740-Humans, pubmed-meshheading:16973740-Phosphorylation, pubmed-meshheading:16973740-Crystallography, X-Ray, pubmed-meshheading:16973740-Ultracentrifugation, pubmed-meshheading:16973740-Membrane Proteins, pubmed-meshheading:16973740-Amino Acid Sequence, pubmed-meshheading:16973740-Models, Biological, pubmed-meshheading:16973740-Molecular Sequence Data, pubmed-meshheading:16973740-Dimerization, pubmed-meshheading:16973740-Structure-Activity Relationship, pubmed-meshheading:16973740-Endoribonucleases, pubmed-meshheading:16973740-Protein Structure, Tertiary, pubmed-meshheading:16973740-Signal Transduction, pubmed-meshheading:16973740-eIF-2 Kinase, pubmed-meshheading:16973740-Protein-Serine-Threonine Kinases, pubmed-meshheading:16973740-Protein Folding, pubmed-meshheading:16973740-Mutant Proteins
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