Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
Pt 9
pubmed:dateCreated
2006-9-1
pubmed:abstractText
IpaD, the putative needle-tip protein of the Shigella flexneri type III secretion system, has been overexpressed and purified. Crystals were grown of the native protein in space group P2(1)2(1)2(1), with unit-cell parameters a = 55.9, b = 100.7, c = 112.0 A, and data were collected to 2.9 A resolution. Analysis of the native Patterson map revealed a peak at 50% of the origin on the Harker section v = 0.5, suggesting twofold non-crystallographic symmetry parallel to the b crystallographic axis. As attempts to derivatize or grow selenomethionine-labelled protein crystals failed, in-drop proteolysis was used to produce new crystal forms. A trace amount of subtilisin Carlsberg was added to IpaD before sparse-matrix screening, resulting in the production of several new crystal forms. This approach produced SeMet-labelled crystals and diffraction data were collected to 3.2 A resolution. The SeMet crystals belong to space group C2, with unit-cell parameters a = 139.4, b = 45.0, c = 99.5 A, beta = 107.9 degrees . An anomalous difference Patterson map revealed peaks on the Harker section v = 0, while the self-rotation function indicates the presence of a twofold noncrystallographic symmetry axis, which is consistent with two molecules per asymmetric unit.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-10545510, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-11169106, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-12571230, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-12595440, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-14962390, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-15030306, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-15103154, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-15731041, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-16254184, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-16263265, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-5700707, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-7957095, http://linkedlifedata.com/resource/pubmed/commentcorrection/16946465-8376337
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
1744-3091
pubmed:author
pubmed:issnType
Electronic
pubmed:day
1
pubmed:volume
62
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
865-8
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2006
pubmed:articleTitle
Expression, limited proteolysis and preliminary crystallographic analysis of IpaD, a component of the Shigella flexneri type III secretion system.
pubmed:affiliation
Laboratory of Molecular Biophysics, Department of Biochemistry, University of Oxford, England.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't, Research Support, N.I.H., Extramural