Source:http://linkedlifedata.com/resource/pubmed/id/16931052
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1
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pubmed:dateCreated |
2006-12-15
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pubmed:abstractText |
Cyclops is a new computer program designed as a graphical front-end that allows easy control and interaction with tasks and programs for 3D reconstruction of biological complexes using cryo-electron microscopy. Cyclops' current plug-ins are designed for automated particle picking and include two new algorithms, automated carbon masking and quaternion based rotation space sampling, which are also presented here. Additional plug-ins are in the pipeline. Cyclops allows straightforward organization and visualization of all data and tasks and allows both interactive and batch-wise processing. Furthermore, it was designed for straightforward implementation in grid architectures. As a front-end to a collection of programs it provides a common interface to these programs, thus enhancing the usability of the suite and the productivity of the user.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Chaperonins,
http://linkedlifedata.com/resource/pubmed/chemical/Escherichia coli Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/GroE protein, E coli,
http://linkedlifedata.com/resource/pubmed/chemical/Heat-Shock Proteins,
http://linkedlifedata.com/resource/pubmed/chemical/Ribosomal Proteins
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pubmed:status |
MEDLINE
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pubmed:month |
Jan
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pubmed:issn |
1047-8477
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
157
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
19-27
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pubmed:dateRevised |
2009-11-19
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pubmed:meshHeading |
pubmed-meshheading:16931052-Algorithms,
pubmed-meshheading:16931052-Chaperonins,
pubmed-meshheading:16931052-Computational Biology,
pubmed-meshheading:16931052-Cryoelectron Microscopy,
pubmed-meshheading:16931052-Escherichia coli Proteins,
pubmed-meshheading:16931052-Heat-Shock Proteins,
pubmed-meshheading:16931052-Ribosomal Proteins,
pubmed-meshheading:16931052-Software,
pubmed-meshheading:16931052-Software Design
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pubmed:year |
2007
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pubmed:articleTitle |
Cyclops: new modular software suite for cryo-EM.
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pubmed:affiliation |
Leiden Institute of Chemistry, Gorlaeus Laboratories, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands. plaisier@chem.leidenuniv.nl
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pubmed:publicationType |
Journal Article,
Evaluation Studies
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