Source:http://linkedlifedata.com/resource/pubmed/id/16909391
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
3
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pubmed:dateCreated |
2006-8-15
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pubmed:abstractText |
A significant proportion of the variation between individuals in gene expression levels is genetic, and it is likely that these differences correlate with phenotypic differences or with risk of disease. Cis-acting polymorphisms are important in determining interindividual differences in gene expression that lead to allelic expression imbalance, which is the unequal expression of homologous alleles in individuals heterozygous for such a polymorphism. This expression imbalance can be detected using a transcribed polymorphism, and, once it is established, the next step is to identify the polymorphisms that are responsible for or predictive of allelic expression levels. We present an expectation-maximization algorithm for such analyses, providing a formal statistical framework to test whether a candidate polymorphism is associated with allelic expression differences.
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pubmed:commentsCorrections |
http://linkedlifedata.com/resource/pubmed/commentcorrection/16909391-12127775,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16909391-12183620,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16909391-12627232,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16909391-12802784,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16909391-12902379,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16909391-15358732,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16909391-15638833,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16909391-16251966,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16909391-9850057
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:status |
MEDLINE
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pubmed:month |
Sep
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pubmed:issn |
0002-9297
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
79
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
539-43
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pubmed:dateRevised |
2009-11-18
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pubmed:meshHeading | |
pubmed:year |
2006
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pubmed:articleTitle |
An expectation-maximization algorithm for the analysis of allelic expression imbalance.
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pubmed:affiliation |
Division of Genomic Medicine, University of Sheffield, United Kingdom.
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pubmed:publicationType |
Journal Article
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