Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
34
pubmed:dateCreated
2006-8-30
pubmed:databankReference
pubmed:abstractText
Photoactivation of the visual rhodopsin, a prototypical G protein-coupled receptor (GPCR), involves efficient conversion of the intrinsic inverse-agonist 11-cis-retinal to the all-trans agonist. This event leads to the rearrangement of the heptahelical transmembrane bundle, which is thought to be shared by hundreds of GPCRs. To examine this activation mechanism, we determined the x-ray crystallographic model of the photoreaction intermediate of rhodopsin, lumirhodopsin, which represents the conformational state having the nearly complete all-trans agonist form of the retinal. A difference electron density map clearly indicated that the distorted all-trans-retinal in the precedent intermediate bathorhodopsin relaxes by dislocation of the beta-ionone ring in lumirhodopsin, along with significant peptide displacement in the middle of helix III, including approximately two helical turns. This local movement results in the breaking of the electrostatic interhelical restraints mediated by many of the conserved residues among rhodopsin-like GPCRs, with consequent acquisition of full activity.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-10696571, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-10713520, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-10736701, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-10864869, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-10926528, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-11425321, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-11495733, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-11743865, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-11972040, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-12167654, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-12629973, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-12835420, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-12871667, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-1326517, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-14002749, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-14532280, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-14559905, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-15220479, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-15251227, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-15299354, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-15306683, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-15327956, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-15329674, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-15491621, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-15778447, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-16284176, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-1991105, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-2184895, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-3207686, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-6828860, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-8864113, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-9048378, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-9287308, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-9504803, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-9757107, http://linkedlifedata.com/resource/pubmed/commentcorrection/16908857-9789004
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Aug
pubmed:issn
0027-8424
pubmed:author
pubmed:issnType
Print
pubmed:day
22
pubmed:volume
103
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
12729-34
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2006
pubmed:articleTitle
Local peptide movement in the photoreaction intermediate of rhodopsin.
pubmed:affiliation
Biological Information Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo 135-0064, Japan.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't