Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
7
pubmed:dateCreated
2006-7-12
pubmed:abstractText
Utilizing a PCR-based subtractive cDNA approach, we demonstrated that the marine diatom Thalassiosira pseudonana exhibits a rapid response at the gene level to elevated concentrations of copper and that this response attenuates over 24 h of continuous exposure. A total of 16 copper-induced genes were identified, 11 of which were completely novel; however, many of the predicted amino acid sequences had characteristics suggestive of roles in ameliorating copper toxicity. Most of the novel genes were not equivalently induced by H2O2- or Cd-induced stress, indicating specificity in response. Two genes that could be assigned functions based on homology were also induced under conditions of general cellular stress. Half of the identified genes were located within two inverted repeats in the genome, and novel genes in one inverted repeat had mRNA levels induced by approximately 500- to 2,000-fold by exposure to copper for 1 h. Additionally, some of the inverted repeat genes demonstrated a dose-dependent response to Cu, but not Cd, and appear to belong to a multigene family. This multigene family may be the diatom functional homolog of metallothioneins.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-10603486, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-10737803, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-10863532, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-11258480, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-11803038, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-12039007, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-12115136, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-12221971, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-12829268, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-12829273, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-1396551, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-1425704, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-14681379, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-14692449, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-15223320, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-15346807, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-15459382, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-16594069, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-16667375, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-1944266, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-2231712, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-2461560, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-2584191, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-2953720, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-3137921, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-3887570, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-3902832, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-7133118, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-7731798, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-7937823, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-7984417, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-8048974, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-8061521, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-8088826, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-8216201, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-8336670, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-8670854, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-8755241, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-8790303, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-8882582, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-9075641, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-9188496, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-9294242, http://linkedlifedata.com/resource/pubmed/commentcorrection/16835459-9599102
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Jul
pubmed:issn
1535-9778
pubmed:author
pubmed:issnType
Print
pubmed:volume
5
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1157-68
pubmed:dateRevised
2010-9-15
pubmed:meshHeading
pubmed-meshheading:16835459-Amino Acid Sequence, pubmed-meshheading:16835459-Cadmium, pubmed-meshheading:16835459-Chromosomes, pubmed-meshheading:16835459-Copper, pubmed-meshheading:16835459-DNA, Complementary, pubmed-meshheading:16835459-Diatoms, pubmed-meshheading:16835459-Down-Regulation, pubmed-meshheading:16835459-Drug Resistance, pubmed-meshheading:16835459-Gene Expression Profiling, pubmed-meshheading:16835459-Gene Expression Regulation, pubmed-meshheading:16835459-Gene Library, pubmed-meshheading:16835459-Genome, pubmed-meshheading:16835459-Hydrogen Peroxide, pubmed-meshheading:16835459-Molecular Sequence Data, pubmed-meshheading:16835459-Nuclear Matrix, pubmed-meshheading:16835459-RNA, Messenger, pubmed-meshheading:16835459-Repetitive Sequences, Nucleic Acid, pubmed-meshheading:16835459-Reverse Transcriptase Polymerase Chain Reaction, pubmed-meshheading:16835459-Sequence Homology, Amino Acid
pubmed:year
2006
pubmed:articleTitle
Gene expression induced by copper stress in the diatom Thalassiosira pseudonana.
pubmed:affiliation
Marine Biology Research Division, Scripps Institution of Oceanography, University of California--San Diego, La Jolla, California 92093-0202, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S.