Source:http://linkedlifedata.com/resource/pubmed/id/16820983
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
4
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pubmed:dateCreated |
2006-7-24
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pubmed:abstractText |
The analysis of expression patterns of transcription-factor genes will be the basis for a better understanding of their biological functions in plants. In this study, we designed and developed an oligo-DNA macroarray consisting of gene-specific probes of 60-65 nucleotides for 288 transcription-factor genes, which cover COL, DOF, ERF, and NAC family genes. To investigate transcription-factor genes that are cooperatively regulated by jasmonate and ethylene in arabidopsis (Arabidopsis thaliana (L.) Heynh.) plants, we analyzed the expression profile of transcription-factor genes using the oligo-DNA macroarray technique in arabidopsis plants treated with methyl jasmonate and 1-aminocyclopropane-1-carboxylic acid. Then, transcript levels of candidate genes-which were selected based on the result of macroarray analysis-were evaluated by the quantitative real-time RT-PCR method. Finally, we identified an ERF family gene that is cooperatively regulated by both hormones, and designated as cooperatively regulated by ethylene and jasmonate 1 (CEJ1).
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical |
http://linkedlifedata.com/resource/pubmed/chemical/Cyclopentanes,
http://linkedlifedata.com/resource/pubmed/chemical/Ethylenes,
http://linkedlifedata.com/resource/pubmed/chemical/Oxylipins,
http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factors,
http://linkedlifedata.com/resource/pubmed/chemical/ethylene,
http://linkedlifedata.com/resource/pubmed/chemical/jasmonic acid
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pubmed:status |
MEDLINE
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pubmed:month |
Jul
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pubmed:issn |
0918-9440
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
119
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
407-13
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pubmed:dateRevised |
2007-11-15
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pubmed:meshHeading |
pubmed-meshheading:16820983-Arabidopsis,
pubmed-meshheading:16820983-Cyclopentanes,
pubmed-meshheading:16820983-Ethylenes,
pubmed-meshheading:16820983-Gene Expression Regulation, Plant,
pubmed-meshheading:16820983-Oligonucleotide Array Sequence Analysis,
pubmed-meshheading:16820983-Oxylipins,
pubmed-meshheading:16820983-Time Factors,
pubmed-meshheading:16820983-Transcription Factors,
pubmed-meshheading:16820983-Up-Regulation
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pubmed:year |
2006
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pubmed:articleTitle |
Identification of genes of the plant-specific transcription-factor families cooperatively regulated by ethylene and jasmonate in Arabidopsis thaliana.
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pubmed:affiliation |
Molecular and Cellular Breeding Research Group, Institute for Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 6, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8566, Japan.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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