Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
8
pubmed:dateCreated
2006-5-10
pubmed:abstractText
SUMO modification plays a critical role in a number of cellular functions including nucleocytoplasmic transport, gene expression, cell cycle and formation of subnuclear structures such as promyelocytic leukemia (PML) bodies. In order to identify the sites where SUMOylation takes place in the cell, we developed an in situ SUMOylation assay using a semi-intact cell system and subsequently combined it with siRNA-based knockdown of nucleoporin RanBP2, also known as Nup358, which is one of the known SUMO E3 proteins. With the in situ SUMOylation assay, we found that both nuclear rim and PML bodies, besides mitotic apparatuses, are major targets for active SUMOylation. The ability to analyze possible SUMO conjugation sites would be a valuable tool to investigate where SUMO E3-like activities and/or SUMO substrates exist in the cell. Specific knockdown of RanBP2 completely abolished SUMOylation along the nuclear rim and dislocated RanGAP1 from the nuclear pore complexes. Interestingly, the loss of RanBP2 markedly reduced the number of PML bodies, in contrast to other, normal-appearing nuclear compartments including the nuclear lamina, nucleolus and chromatin, suggesting a novel link between RanBP2 and PML bodies. SUMOylation facilitated by RanBP2 at the nuclear rim may be a key step for the formation of a particular subnuclear organization. Our data imply that SUMO E3 proteins like RanBP2 facilitate spatio-temporal SUMOylation for certain nuclear structure and function.
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
http://linkedlifedata.com/resource/pubmed/chemical/GTPase-Activating Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Molecular Chaperones, http://linkedlifedata.com/resource/pubmed/chemical/Neoplasm Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Nuclear Pore Complex Proteins, http://linkedlifedata.com/resource/pubmed/chemical/Nuclear Proteins, http://linkedlifedata.com/resource/pubmed/chemical/PML protein, human, http://linkedlifedata.com/resource/pubmed/chemical/RANGAP1 protein, human, http://linkedlifedata.com/resource/pubmed/chemical/Small Ubiquitin-Related Modifier..., http://linkedlifedata.com/resource/pubmed/chemical/Transcription Factors, http://linkedlifedata.com/resource/pubmed/chemical/Tumor Suppressor Proteins, http://linkedlifedata.com/resource/pubmed/chemical/ran-binding protein 2
pubmed:status
MEDLINE
pubmed:month
May
pubmed:issn
0014-4827
pubmed:author
pubmed:issnType
Print
pubmed:day
1
pubmed:volume
312
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
1418-30
pubmed:dateRevised
2006-11-15
pubmed:meshHeading
pubmed-meshheading:16688858-Active Transport, Cell Nucleus, pubmed-meshheading:16688858-Biological Assay, pubmed-meshheading:16688858-Cell Compartmentation, pubmed-meshheading:16688858-Cell Nucleus, pubmed-meshheading:16688858-Down-Regulation, pubmed-meshheading:16688858-GTPase-Activating Proteins, pubmed-meshheading:16688858-HeLa Cells, pubmed-meshheading:16688858-Humans, pubmed-meshheading:16688858-Intracellular Membranes, pubmed-meshheading:16688858-Mitosis, pubmed-meshheading:16688858-Molecular Chaperones, pubmed-meshheading:16688858-Neoplasm Proteins, pubmed-meshheading:16688858-Nuclear Envelope, pubmed-meshheading:16688858-Nuclear Pore Complex Proteins, pubmed-meshheading:16688858-Nuclear Proteins, pubmed-meshheading:16688858-Organelles, pubmed-meshheading:16688858-Protein Transport, pubmed-meshheading:16688858-RNA Interference, pubmed-meshheading:16688858-Small Ubiquitin-Related Modifier Proteins, pubmed-meshheading:16688858-Transcription Factors, pubmed-meshheading:16688858-Tumor Suppressor Proteins
pubmed:year
2006
pubmed:articleTitle
In situ SUMOylation analysis reveals a modulatory role of RanBP2 in the nuclear rim and PML bodies.
pubmed:affiliation
Department of Regeneration Medicine, Institute of Molecular Embryology and Genetics, Kumamoto University, 2-2-1 Honjo, Kumanmoto 860-0811, Japan.
pubmed:publicationType
Journal Article, Research Support, Non-U.S. Gov't