Source:http://linkedlifedata.com/resource/pubmed/id/16678136
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1
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pubmed:dateCreated |
2006-5-17
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pubmed:abstractText |
Infrared and Raman spectroscopy were applied to identify restraints for the structure determination of the 20 amino acid loop between two beta-sheets of the N-terminal region of the PsbQ protein of the oxygen evolving complex of photosystem II from Spinacia oleracea by restraint-based homology modeling. One of the initial models has shown a stable fold of the loop in a 20 ns molecular dynamics simulation that is in accordance with spectroscopic data. Cleavage of the first 12 amino acids leads to a permanent drift in the root means square deviation of the protein backbone and induces major structural changes.
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pubmed:commentsCorrections | |
pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Jun
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pubmed:issn |
0006-291X
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
23
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pubmed:volume |
345
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
287-91
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pubmed:dateRevised |
2009-7-17
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pubmed:meshHeading |
pubmed-meshheading:16678136-Amino Acid Sequence,
pubmed-meshheading:16678136-Computer Simulation,
pubmed-meshheading:16678136-Models, Chemical,
pubmed-meshheading:16678136-Models, Molecular,
pubmed-meshheading:16678136-Molecular Sequence Data,
pubmed-meshheading:16678136-Photosynthetic Reaction Center Complex Proteins,
pubmed-meshheading:16678136-Photosystem II Protein Complex,
pubmed-meshheading:16678136-Plant Proteins,
pubmed-meshheading:16678136-Protein Conformation,
pubmed-meshheading:16678136-Protein Structure, Secondary,
pubmed-meshheading:16678136-Spinacia oleracea
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pubmed:year |
2006
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pubmed:articleTitle |
Structure and dynamics of the N-terminal loop of PsbQ from photosystem II of Spinacia oleracea.
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pubmed:affiliation |
Laboratory of High Performance Computing, Institute of Systems Biology and Ecology of AS CR, Institute of Physical Biology of USB, Zámek 136, 37333 Nové Hrady, Czech Republic.
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pubmed:publicationType |
Journal Article,
Research Support, U.S. Gov't, Non-P.H.S.,
Research Support, Non-U.S. Gov't
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