Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
13
pubmed:dateCreated
2006-3-29
pubmed:databankReference
pubmed:abstractText
Many virulence factors secreted from pathogenic Gram-negative bacteria are autotransporter proteins. The final step of autotransporter secretion is C --> N-terminal threading of the passenger domain through the outer membrane (OM), mediated by a cotranslated C-terminal porin domain. The native structure is formed only after this final secretion step, which requires neither ATP nor a proton gradient. Sequence analysis reveals that, despite size, sequence, and functional diversity among autotransporter passenger domains, >97% are predicted to form parallel beta-helices, indicating this structural topology may be important for secretion. We report the folding behavior of pertactin, an autotransporter passenger domain from Bordetella pertussis. The pertactin beta-helix folds reversibly in isolation, but folding is much slower than expected based on size and native-state topology. Surprisingly, pertactin is not prone to aggregation during folding, even though folding is extremely slow. Interestingly, equilibrium denaturation results in the formation of a partially folded structure, a stable core comprising the C-terminal half of the protein. Examination of the pertactin crystal structure does not reveal any obvious reason for the enhanced stability of the C terminus. In vivo, slow folding would prevent premature folding of the passenger domain in the periplasm, before OM secretion. Moreover, the extra stability of the C-terminal rungs of the beta-helix might serve as a template for the formation of native protein during OM secretion; hence, vectorial folding of the beta-helix could contribute to the energy-independent translocation mechanism. Coupled with the sequence analysis, the results presented here suggest a general mechanism for autotransporter secretion.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-10510237, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-10737931, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-11208794, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-11288179, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-11348687, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-11545600, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-11703654, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-11980709, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-11988218, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-12379715, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-12509434, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-12603741, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-12910271, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-14681378, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-14699090, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-14765110, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-15014442, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-15079085, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-15130125, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-15151995, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-15450607, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-15590781, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-15615856, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-15728184, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-1600950, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-16092525, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-16262782, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-2189728, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-7806503, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-8520481, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-8609998, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-8797816, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-8921899, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-8969522, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-9096209, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-9254694, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-9394291, http://linkedlifedata.com/resource/pubmed/commentcorrection/16549796-9778731
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Mar
pubmed:issn
0027-8424
pubmed:author
pubmed:issnType
Print
pubmed:day
28
pubmed:volume
103
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
4918-23
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2006
pubmed:articleTitle
Pertactin beta-helix folding mechanism suggests common themes for the secretion and folding of autotransporter proteins.
pubmed:affiliation
Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556-5670, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S., Research Support, Non-U.S. Gov't