| pubmed-article:16539539 | rdf:type | pubmed:Citation | lld:pubmed |
| pubmed-article:16539539 | lifeskim:mentions | umls-concept:C0679792 | lld:lifeskim |
| pubmed-article:16539539 | lifeskim:mentions | umls-concept:C0282580 | lld:lifeskim |
| pubmed-article:16539539 | lifeskim:mentions | umls-concept:C0681842 | lld:lifeskim |
| pubmed-article:16539539 | lifeskim:mentions | umls-concept:C1705194 | lld:lifeskim |
| pubmed-article:16539539 | lifeskim:mentions | umls-concept:C0392762 | lld:lifeskim |
| pubmed-article:16539539 | lifeskim:mentions | umls-concept:C1519814 | lld:lifeskim |
| pubmed-article:16539539 | pubmed:issue | 1 | lld:pubmed |
| pubmed-article:16539539 | pubmed:dateCreated | 2006-3-16 | lld:pubmed |
| pubmed-article:16539539 | pubmed:abstractText | The accurate computational prediction of T-cell epitopes can greatly reduce the experimental overhead implicit in candidate epitope identification within genomic sequences. In this article we present MHCPred 2.0, an enhanced version of our online, quantitative T-cell epitope prediction server. The previous version of MHCPred included mostly alleles from the human leukocyte antigen A (HLA-A) locus. In MHCPred 2.0, mouse models are added and computational constraints removed. Currently the server includes 11 human HLA class I, three human HLA class II, and three mouse class I models. Additionally, a binding model for the human transporter associated with antigen processing (TAP) is incorporated into the new MHCPred. A tool for the design of heteroclitic peptides is also included within the server. To refine the veracity of binding affinities prediction, a confidence percentage is also now calculated for each peptide predicted. AVAILABILITY: As previously, MHCPred 2.0 is freely available at the URL http://www.jenner.ac.uk/MHCPred/ CONTACT: Darren R. Flower (darren.flower@jenner.ac.uk). | lld:pubmed |
| pubmed-article:16539539 | pubmed:language | eng | lld:pubmed |
| pubmed-article:16539539 | pubmed:journal | http://linkedlifedata.com/r... | lld:pubmed |
| pubmed-article:16539539 | pubmed:citationSubset | IM | lld:pubmed |
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| pubmed-article:16539539 | pubmed:status | MEDLINE | lld:pubmed |
| pubmed-article:16539539 | pubmed:issn | 1175-5636 | lld:pubmed |
| pubmed-article:16539539 | pubmed:author | pubmed-author:FlowerDarren... | lld:pubmed |
| pubmed-article:16539539 | pubmed:author | pubmed-author:DoytchinovaIr... | lld:pubmed |
| pubmed-article:16539539 | pubmed:author | pubmed-author:GuanPingpingP | lld:pubmed |
| pubmed-article:16539539 | pubmed:author | pubmed-author:Hattotuwagama... | lld:pubmed |
| pubmed-article:16539539 | pubmed:issnType | Print | lld:pubmed |
| pubmed-article:16539539 | pubmed:volume | 5 | lld:pubmed |
| pubmed-article:16539539 | pubmed:owner | NLM | lld:pubmed |
| pubmed-article:16539539 | pubmed:authorsComplete | Y | lld:pubmed |
| pubmed-article:16539539 | pubmed:pagination | 55-61 | lld:pubmed |
| pubmed-article:16539539 | pubmed:dateRevised | 2010-4-12 | lld:pubmed |
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| pubmed-article:16539539 | pubmed:meshHeading | pubmed-meshheading:16539539... | lld:pubmed |
| pubmed-article:16539539 | pubmed:year | 2006 | lld:pubmed |
| pubmed-article:16539539 | pubmed:articleTitle | MHCPred 2.0: an updated quantitative T-cell epitope prediction server. | lld:pubmed |
| pubmed-article:16539539 | pubmed:affiliation | Edward Jenner Institute for Vaccine Research, Compton, Berkshire, UK. | lld:pubmed |
| pubmed-article:16539539 | pubmed:publicationType | Journal Article | lld:pubmed |
| pubmed-article:16539539 | pubmed:publicationType | Research Support, Non-U.S. Gov't | lld:pubmed |
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