Source:http://linkedlifedata.com/resource/pubmed/id/16536532
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
11
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pubmed:dateCreated |
2006-3-15
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pubmed:abstractText |
Infrared/UV hole-burning spectroscopy is performed on individual conformers of the protected dipeptide Z-Aib-Pro-NHMe. The extended IR range probed in this study allows one to elucidate both the H-bonding motif (5-7 microm) as well as the backbone structure (7-10 microm). Comparison with DFT calculations shows that the backbone is locally constrained to an alpha-conformation by Aib and to a gamma-turn by Pro. The gamma-turn motif observed here is intriguing since the condensed phase structure is known to be a beta-turn. This is the first actual observation of such a discrepancy, and it emphasizes the subtle balance between intra- and intermolecular forces, which is responsible for the relative stability of the different secondary structure motifs.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:month |
Mar
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pubmed:issn |
0002-7863
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:day |
22
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pubmed:volume |
128
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
3592-7
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pubmed:dateRevised |
2006-11-15
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pubmed:meshHeading |
pubmed-meshheading:16536532-Aminoisobutyric Acids,
pubmed-meshheading:16536532-Dipeptides,
pubmed-meshheading:16536532-Gases,
pubmed-meshheading:16536532-Models, Molecular,
pubmed-meshheading:16536532-Proline,
pubmed-meshheading:16536532-Protein Structure, Secondary,
pubmed-meshheading:16536532-Spectrophotometry, Infrared,
pubmed-meshheading:16536532-Spectrophotometry, Ultraviolet,
pubmed-meshheading:16536532-Thermodynamics
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pubmed:year |
2006
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pubmed:articleTitle |
Mid-infrared spectroscopy of protected peptides in the gas phase: a probe of the backbone conformation.
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pubmed:affiliation |
FOM Institute for Plasma Physics Rijnhuizen, Edisonbaan 14, NL-3439 MN Nieuwegein, The Netherlands.
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't
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