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rdf:type |
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lifeskim:mentions |
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pubmed:issue |
Database issue
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pubmed:dateCreated |
2005-12-29
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pubmed:abstractText |
We present here LOCATE, a curated, web-accessible database that houses data describing the membrane organization and subcellular localization of proteins from the FANTOM3 Isoform Protein Sequence set. Membrane organization is predicted by the high-throughput, computational pipeline MemO. The subcellular locations of selected proteins from this set were determined by a high-throughput, immunofluorescence-based assay and by manually reviewing >1700 peer-reviewed publications. LOCATE represents the first effort to catalogue the experimentally verified subcellular location and membrane organization of mammalian proteins using a high-throughput approach and provides localization data for approximately 40% of the mouse proteome. It is available at http://locate.imb.uq.edu.au.
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pubmed:grant |
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pubmed:commentsCorrections |
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-10802651,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-11152613,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-11532438,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-11590105,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-11591653,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-11904358,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-12519980,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-12819131,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-14681378,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-14681400,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-14681468,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-14681473,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-15271782,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-15581431,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-15608167,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-15608212,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-15608229,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-15608240,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-15608248,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-15608251,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-15608257,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-16141072,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-8130217,
http://linkedlifedata.com/resource/pubmed/commentcorrection/16381849-9278280
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pubmed:language |
eng
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pubmed:journal |
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pubmed:citationSubset |
IM
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pubmed:chemical |
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pubmed:status |
MEDLINE
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pubmed:month |
Jan
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pubmed:issn |
1362-4962
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pubmed:author |
pubmed-author:AturaliyaRajith NRN,
pubmed-author:CarninciPieroP,
pubmed-author:DavisMelissa JMJ,
pubmed-author:FinkJ LynnJL,
pubmed-author:HansonKellyK,
pubmed-author:HayashizakiYoshihideY,
pubmed-author:KaiChikatoshiC,
pubmed-author:KawaiJunJ,
pubmed-author:TeasdaleMelvena SMS,
pubmed-author:TeasdaleRohan DRD,
pubmed-author:ZhangFashengF
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pubmed:issnType |
Electronic
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pubmed:day |
1
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pubmed:volume |
34
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
D213-7
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pubmed:dateRevised |
2009-11-18
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pubmed:meshHeading |
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pubmed:year |
2006
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pubmed:articleTitle |
LOCATE: a mouse protein subcellular localization database.
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pubmed:affiliation |
ARC Centre in Bioinformatics, University of Queensland, St Lucia, Queensland 4072, Australia. l.fink@imb.uq.edu.au
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pubmed:publicationType |
Journal Article,
Research Support, Non-U.S. Gov't,
Research Support, N.I.H., Extramural
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