Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
12
pubmed:dateCreated
2005-12-7
pubmed:databankReference
http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ115513, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ115514, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177506, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177507, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177508, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177509, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177510, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177511, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177512, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177513, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177514, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177515, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177516, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177517, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177518, http://linkedlifedata.com/resource/pubmed/xref/GENBANK/DQ177519
pubmed:abstractText
Degenerate primers were used to amplify 14 distinct reductive-dehalogenase-homologous (RDH) genes from the Dehalococcoides-containing mixed culture KB1. Most of the corresponding predicted proteins were highly similar (97 to >99% amino acid identity) to previously reported Dehalococcoides reductive dehalogenases. To examine the differential transcription of these RDH genes, KB1 was split into five subcultures amended with either trichloroethene, cis-1,2-dichloroethene, vinyl chloride, 1,2-dichlorethane, or no chlorinated electron acceptor. Total RNA was extracted following the onset of reductive dechlorination, and RDH transcripts were reverse transcribed and amplified using degenerate primers. The results indicate that the transcription of RDH genes requires the presence of a chlorinated electron acceptor, and for all treatments, multiple RDH genes were simultaneously transcribed, with transcripts of two of the genes being present under all four electron-accepting conditions. Two of the transcribed sequences were highly similar to reported vinyl chloride reductase genes, namely, vcrA from Dehalococcoides sp. strain VS and bvcA from Dehalococcoides sp. strain BAV1. These findings suggest that multiple RDH genes are induced by a single chlorinated substrate and that multiple reductive dehalogenases contribute to chloroethene degradation in KB1.
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-10357859, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-10400648, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-10583967, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-10671186, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-11004165, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-11097881, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-11117744, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-11158353, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-11400736, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-11511863, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-12057934, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-12381026, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-12420924, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-12523427, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-12571017, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-12571022, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-12688583, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-12840758, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-12854978, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-15240287, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-15294827, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-15345412, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-15345442, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-15466590, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-15487929, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-15637277, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-16104866, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-7665493, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-8117084, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-8663199, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-9171062, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-9224702, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-9575235, http://linkedlifedata.com/resource/pubmed/commentcorrection/16332811-9781670
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Dec
pubmed:issn
0099-2240
pubmed:author
pubmed:issnType
Print
pubmed:volume
71
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
8257-64
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2005
pubmed:articleTitle
Multiple reductive-dehalogenase-homologous genes are simultaneously transcribed during dechlorination by Dehalococcoides-containing cultures.
pubmed:affiliation
Department of Chemical Engineering and Applied Chemistry, University of Toronto, 200 College St., Toronto, Ontario M5S 3E5, Canada.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, Non-P.H.S., Research Support, Non-U.S. Gov't