Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
41
pubmed:dateCreated
2005-10-12
pubmed:databankReference
pubmed:abstractText
The unique ligation properties of metal ions are widely exploited by proteins, with approximately one-third of all proteins estimated to be metalloproteins. Although antibodies use various mechanisms for recognition, to our knowledge, none has ever been characterized that uses an interfacial metal. We previously described a family of CD4-reactive antibodies, the archetype being Q425. CD4:Q425 engagement does not interfere with CD4:HIV-1 gp120 envelope glycoprotein binding, but it blocks subsequent steps required for viral entry. Here, we use surface-plasmon resonance to show that Q425 requires calcium for recognition of CD4. Specifically, Q425 binding of calcium resulted in a 55,000-fold enhancement in affinity for CD4. X-ray crystallographic analyses of Q425 in the presence of Ca(2+), Ba(2+), or EDTA revealed an exposed metal-binding site, partially coordinated by five atoms contributed from four antibody complementarity-determining regions. The results suggest that Q425 recognition of CD4 involves direct ligation of antigen by the Q425-held calcium, with calcium binding each ligating atom of CD4 with approximately 1.5 kcal/mol of binding energy. This energetic contribution, which is greater than that from a typical protein atom, demonstrates how interfacial metal ligation can play a unique role in antigen recognition.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-10222271, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-11352579, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-11553463, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-11880619, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-12478295, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-12520009, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-12557186, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-12646921, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-12829775, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-12887918, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-14981267, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-15367639, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-15582401, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-15723805, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-1698911, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-2024118, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-2116666, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-2395868, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-2922606, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-3681981, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-6300689, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-8095303, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-8341642, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-8729451, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-9168119, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-9757107, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-9833317, http://linkedlifedata.com/resource/pubmed/commentcorrection/16195378-9933605
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Oct
pubmed:issn
0027-8424
pubmed:author
pubmed:issnType
Print
pubmed:day
11
pubmed:volume
102
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
14575-80
pubmed:dateRevised
2010-9-20
pubmed:meshHeading
pubmed:year
2005
pubmed:articleTitle
Interfacial metal and antibody recognition.
pubmed:affiliation
Vaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
pubmed:publicationType
Journal Article, Comparative Study, Research Support, U.S. Gov't, P.H.S., Research Support, Non-U.S. Gov't, Research Support, N.I.H., Extramural