Source:http://linkedlifedata.com/resource/pubmed/id/16180470
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Predicate | Object |
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rdf:type | |
lifeskim:mentions | |
pubmed:issue |
1-2
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pubmed:dateCreated |
2005-9-26
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pubmed:abstractText |
A multispecies, two- and three-dimensional model was developed, based on a previously published planar biofilm model, and the biochemical structure of the ADM1. Several soluble substrates diffuse and react in the granule. Local pH is calculated from acid-base equilibria and charge balance. The model uses individual-based representation of biomass particles within the granule (biofilm), and describes spreading by an iterative pushing technique. The overall computational domain consists of one granule, and is divided into a grid with Cartesian coordinates. The number of grid elements does not limit the number of biomass particles, and it is not necessary to use grid-spreading techniques, such as cellular automata, which result in Cartesian artefacts. The model represents both microscopic and macroscopic features in granule structure, previously observed using in-situ molecular techniques, and can be effectively used to interpret these results.
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pubmed:language |
eng
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pubmed:journal | |
pubmed:citationSubset |
IM
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pubmed:chemical | |
pubmed:status |
MEDLINE
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pubmed:issn |
0273-1223
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pubmed:author | |
pubmed:issnType |
Print
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pubmed:volume |
52
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pubmed:owner |
NLM
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pubmed:authorsComplete |
Y
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pubmed:pagination |
501-7
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pubmed:dateRevised |
2005-11-17
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pubmed:meshHeading |
pubmed-meshheading:16180470-Acetates,
pubmed-meshheading:16180470-Bacteria, Anaerobic,
pubmed-meshheading:16180470-Biofilms,
pubmed-meshheading:16180470-Biomass,
pubmed-meshheading:16180470-Butyrates,
pubmed-meshheading:16180470-Carbohydrate Metabolism,
pubmed-meshheading:16180470-Hydrogen,
pubmed-meshheading:16180470-Microscopy, Confocal,
pubmed-meshheading:16180470-Models, Biological,
pubmed-meshheading:16180470-Propionates
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pubmed:year |
2005
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pubmed:articleTitle |
Multidimensional modelling of anaerobic granules.
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pubmed:affiliation |
Department of Biotechnology, Delft University of Technology, Julianalaan 67, 2628 Delft, The Netherlands. c.picioreanu@tnw.tudelft.nl
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pubmed:publicationType |
Journal Article
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