Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
Pt 3
pubmed:dateCreated
2005-10-21
pubmed:abstractText
For animals, dietary protein is critical for the nutrition of the organism and, at the cellular level, protein nutrition translates into amino acid availability. Amino acid deprivation triggers the AAR (amino acid response) pathway, which causes enhanced transcription from specific target genes. The present results show that C/EBPbeta (CCAAT/enhancer-binding protein beta) mRNA and protein content were increased following the deprivation of HepG2 human hepatoma cells of a single amino acid. Although there was a modest increase in mRNA half-life following histidine limitation, the primary mechanism for the elevated steady-state mRNA was increased transcription. Transient transfection documented that C/EBPbeta genomic fragments containing the 8451 bp 5' upstream of the transcription start site did not contain amino-acid-responsive elements. However, deletion analysis of the genomic region located 3' downstream of the protein coding sequence revealed that a 93 bp fragment contained an amino-acid-responsive activity that functioned as an enhancer. Exogenous expression of ATF4 (activating transcription factor 4), known to activate other genes through amino acid response elements, caused increased transcription from reporter constructs containing the C/EBPbeta enhancer in cells maintained in complete amino acid medium. Chromatin immunoprecipitation demonstrated that RNA polymerase II is bound at the C/EBPbeta promoter and at the 93 bp regulatory region in vivo, whereas ATF4 binds to the enhancer region only. Immediately following amino acid removal, the kinetics of binding for ATF4, ATF3, and C/EBPbeta itself to the 93 bp regulatory region were similar to those observed for the amino-acid-responsive asparagine synthetase gene. Collectively the findings show that expression of C/EBPbeta, which contributes to the regulation of amino-acid-responsive genes, is itself controlled by amino acid availability through transcription.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-10085237, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-10319019, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-10856289, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-10921906, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-10982836, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-11399064, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-11415466, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-11677247, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-11960987, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-12006103, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-12161447, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-12196519, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-12351626, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-12543260, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-12628003, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-12668962, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-12842822, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-12881527, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-14523001, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-14623874, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-14630918, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-14715082, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-14729979, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-15090907, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-15102854, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-15247321, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-15333730, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-15385533, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-15522208, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-16011459, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-8181673, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-8713059, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-9211906, http://linkedlifedata.com/resource/pubmed/commentcorrection/16026328-9343434
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Nov
pubmed:issn
1470-8728
pubmed:author
pubmed:issnType
Electronic
pubmed:day
1
pubmed:volume
391
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
649-58
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2005
pubmed:articleTitle
Amino-acid limitation induces transcription from the human C/EBPbeta gene via an enhancer activity located downstream of the protein coding sequence.
pubmed:affiliation
Department of Biochemistry and Molecular Biology, Genetics Institute, and Shands Cancer Center, University of Florida College of Medicine, Gainesville, FL 32610, USA.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S., Research Support, N.I.H., Extramural