Statements in which the resource exists as a subject.
PredicateObject
rdf:type
lifeskim:mentions
pubmed:issue
9
pubmed:dateCreated
2005-9-5
pubmed:abstractText
Phytochromes mediate a profound developmental shift when dark-grown seedlings are exposed to light. Here, we show that a subset of genes is upregulated in phytochrome B (phyB) mutants even before dark-grown Arabidopsis thaliana seedlings are exposed to light. Most of these genes bear the RY cis motif, which is a binding site of the transcription factor ABSCISIC ACID INSENSITIVE3 (ABI3), and the phyB mutation also enhances ABI3 expression. These changes in transcriptome have physiological consequences, because seedlings of the abi3 mutant showed enhanced responses to pulses of far-red light, whereas ABI3 overexpressers exhibited the opposite pattern. Seedlings of the wild type derived from seeds germinated in full darkness showed enhanced expression of genes bearing the RY cis motif and reduced responses to far-red light. We propose that, via changes in ABI3 expression, light, perceived mainly by phyB in the seed, generates a downstream transdevelopmental phase signal that preconditions the seedling to its most likely environment.
pubmed:grant
pubmed:commentsCorrections
http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-10359846, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-10417700, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-10634906, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-10758492, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-10899984, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-11161059, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-11481498, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-11752374, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-11950971, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-12084821, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-12172029, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-12220265, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-12225661, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-12225670, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-12417707, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-12432076, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-12857845, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-12883005, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-14535885, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-14681534, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-14982991, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-15479710, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-15494554, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-15568973, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-15797908, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-2441623, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-7690685, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-7732376, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-7827492, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-9351250, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-9367439, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-9536072, http://linkedlifedata.com/resource/pubmed/commentcorrection/16024587-9539814
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:chemical
pubmed:status
MEDLINE
pubmed:month
Sep
pubmed:issn
1040-4651
pubmed:author
pubmed:issnType
Print
pubmed:volume
17
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
2507-16
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed:year
2005
pubmed:articleTitle
Phytochrome control of the Arabidopsis transcriptome anticipates seedling exposure to light.
pubmed:affiliation
Instituto de Investigaciones en Ingenieria Genetica y Biologia Molecular, 1428 Buenos Aires, Argentina.
pubmed:publicationType
Journal Article, Research Support, U.S. Gov't, P.H.S., Research Support, Non-U.S. Gov't, Research Support, N.I.H., Extramural