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PredicateObject
rdf:type
lifeskim:mentions
pubmed:dateCreated
2005-7-7
pubmed:abstractText
Users of microarray technology typically strive to use universally acceptable data analysis strategies to determine significant expression changes in their experiments. One of the most frequently utilised methods for gene expression data analysis is SAM (significance analysis of microarrays). The impact of selection thresholds, on the output from SAM, may critically alter the conclusion of a study, yet this consideration has not been systematically evaluated in any publication.
pubmed:commentsCorrections
pubmed:language
eng
pubmed:journal
pubmed:citationSubset
IM
pubmed:status
MEDLINE
pubmed:issn
1471-2105
pubmed:author
pubmed:issnType
Electronic
pubmed:volume
6
pubmed:owner
NLM
pubmed:authorsComplete
Y
pubmed:pagination
129
pubmed:dateRevised
2009-11-18
pubmed:meshHeading
pubmed-meshheading:15921534-Adult, pubmed-meshheading:15921534-Aged, pubmed-meshheading:15921534-Algorithms, pubmed-meshheading:15921534-Computational Biology, pubmed-meshheading:15921534-Data Interpretation, Statistical, pubmed-meshheading:15921534-Gene Expression Profiling, pubmed-meshheading:15921534-Humans, pubmed-meshheading:15921534-Microarray Analysis, pubmed-meshheading:15921534-Middle Aged, pubmed-meshheading:15921534-Models, Genetic, pubmed-meshheading:15921534-Models, Statistical, pubmed-meshheading:15921534-Muscle, Skeletal, pubmed-meshheading:15921534-Oligonucleotide Array Sequence Analysis, pubmed-meshheading:15921534-Pattern Recognition, Automated, pubmed-meshheading:15921534-Phenotype, pubmed-meshheading:15921534-Research Design, pubmed-meshheading:15921534-Software, pubmed-meshheading:15921534-Software Design
pubmed:year
2005
pubmed:articleTitle
Considerations when using the significance analysis of microarrays (SAM) algorithm.
pubmed:affiliation
Center for Genomics and Bioinformatics, Karolinska Institutet, Berzelius Väg, 35, 171 77 Stockholm, Sweden. ola.larsson@cgb.ki.se
pubmed:publicationType
Journal Article